Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0922 ATGGAGTACCTTCCCGTTGAAGTGATTGGTAACATACTATCTCATGTTGGATCTGCTCGGGATGTCGTGATTGCATCAGCAACATGTAAAAAATGGAGAGAAGCTTGGCGCAACCACCTGCACACCCTGTCATTCAATTCCAATGACTGGCCCATCTATCATGAGCTAAACCCATGTAGATTGGAAATACTTATCACTCAAACGATTTTCCAAACCAAAGCACTGCAGTGCTTAACCATTTTCATGGACGATGTGGATGAATTCTCTGCTGCCCCTGTCATTGCTTGGCTTATGTATACCAGGGATTCCTTGCGCCAATTACTATATAATGTGAAGACGACTCCAAATTTCAATATCATTGAAAAATGTGGGAGGCAAAAACTGGAGGTGTTGGCATTGGCTCATAATTCTATTACAGGTGTAGAGCCCAGTTATAAAAAATTTCCTTGCTTGAAGTCGCTTTCACTAAGTTATGTAAGCATCTCAGCATTGGACCTCAGCCTTCTAATTGCTGCTTGTCCAAAACTTGAAACCTTGAACATTGTTAGCCCAGAAATTGCTATGTCAGATTCACAGGCTTCCATGGAACTCAACAGCTCTTCTGTCAAAAATTTCTATGTTGAATCATTTGGTTTGGACAAATTCATATTGGACTCAGATAAGCTTGAGAATCTACATCTCAAAGACTGTACCTTCGATGTATTTGAATTATCTGGCAAAGGAACCTTGAAAGCACTAAAGATTGACGATGTGAGTGTCATCCATCTTGATATTGGTGAGAACACGGAGAATCTCGAGATTGTGGATGTTTGTAACTTCACAATTATGTGGCCAAAATTTTATCATATGATCTCCAAGGCGTCGAATCTATCTAAGCTGAGGCTGTGGGGTGTTGTATTTGACGATGAGGATGAGGTTGTGGATTTAGAGACAATTTCTTCATGCTTTCCTCGGTTAACACACCTGTCCCTGAGCTATGACTCAAAAGATGGAGTACTTCATTACGGGTTGCAGGGTCGGTCTCTTTTGGTGAATGTGGTGATGTTGGAAGTTGGATGGACTGCTATCAACGAGCTCTTCCAAGATTGGGTTGCCGGACTGTTGGAAAGGTGTCCCAATTTGAAAAGATTGATTATTCATGGGGTTGTTTCAGAGGTCAAAACCCATGAAGAGTGTCAGATTTTTGCCAAATTTACAGAATCCATTCTTCACCTGGGAAGAAAATATATGGATTTAAAGATTGAGTGTGACTATGAGTAG 1260 0.4095 MEYLPVEVIGNILSHVGSARDVVIASATCKKWREAWRNHLHTLSFNSNDWPIYHELNPCRLEILITQTIFQTKALQCLTIFMDDVDEFSAAPVIAWLMYTRDSLRQLLYNVKTTPNFNIIEKCGRQKLEVLALAHNSITGVEPSYKKFPCLKSLSLSYVSISALDLSLLIAACPKLETLNIVSPEIAMSDSQASMELNSSSVKNFYVESFGLDKFILDSDKLENLHLKDCTFDVFELSGKGTLKALKIDDVSVIHLDIGENTENLEIVDVCNFTIMWPKFYHMISKASNLSKLRLWGVVFDDEDEVVDLETISSCFPRLTHLSLSYDSKDGVLHYGLQGRSLLVNVVMLEVGWTAINELFQDWVAGLLERCPNLKRLIIHGVVSEVKTHEECQIFAKFTESILHLGRKYMDLKIECDYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0922 419 SUPERFAMILY RNI-like 61 381 - -
Lele08g0922 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Lele08g0922 419 PANTHER F-BOX PROTEIN-LIKE 3 387 - -
Lele08g0922 419 Gene3D Ribonuclease Inhibitor 94 408 IPR032675 -
Lele08g0922 419 Pfam F-box-like 2 37 IPR001810 GO:0005515
Lele08g0922 419 SUPERFAMILY F-box domain 2 49 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0922 Lele-ChrLele08 5802649 5803908 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0922 08 5802649 5803908 Lele08g0922 08 5802649 5803908 ECH
Lele05g1074 05 6659444 6660700 Lele08g0922 08 5802649 5803908 hybridization
Lele06g0935 06 5767159 5769868 Lele08g0922 08 5802649 5803908 hybridization