Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0935 ATGGATTTGGTGCAAGGGAGTGATTGCTGCCCAACCAGCGGCTTTGCAAATGGTTTGCCCTGCTCGCTATCAAAACATCCCCGTGCAAAGCTACGCCGTTTCGCTGGAAGCAAAAATGATTCTTTTCGGCAAGAATACTTGTCTTCAGCTCTTCCCTACAGTCCAGACCTAACAATAAGTGTTGATGCAGGCGCAACTAGGACAGAATTTCGTAACAAGCACGGGCTATGTATGAGGCATTCGTCGAATCAAAATCAATATCAACCTCGCCACAGCTTTGGTCGTTTGTTTCCATTTGGCTGTTCAGATAATCGGTTTCCTGTTACTGCCCGAGCGGACGATCGTTTCTTTCTCCCGGTTTGTGGAAACTATTTGCTAGTCTGCTTCAGTATTCGTAATTCTTCAAGTATGGAGTACCTTCCCGTTGAAGTGATTGGTAACATACTATCTCATGTTGGATCTGCTCGGGATGTCGTGCTTGCATCAGCAACATGTAAAAAATGGAGAGAAGCTTGGCGCAACCACCTGCACACCCTGTCATTCAATTCCAATGACTGGCCCATCTATCATGAGCTAAACCCATGTAGATTGGAAATACTCATCACTCAAACGATTTTCCAAACCAAAGCACTGCAGTGCTTAACCATTTTCATGGACGATGTGGATGAATTCTCTGCTGCCCCTGTCATTGCTTGGCTTATGTATACCAGGGATTCCTTGCGCCAATTACTTTATAATGTGAAGACGACTCCAAATTTCAATATCATTGAAAAATGTGGGAGGCAAAAACTGGAGGTGTTGGCATTGGCTCATAATTCTATTACAGGTGTAGAGCCCAGTTATAAAAAATTTCCTTGCTTGAAGTCGCTTTCATTAAGTTATGTTAGCATCTCAGCATTGGACCTCAGCCTTCTAATTTCTGCTTGTCCAAAACTTGAAACCTTAAACATTGTTAGCCCAGAAATTGCTATGTCAGATTCACAGGCTTCCATGGAACTCAACAGCTCTTCTGTCAAAAATTTCTATGTTGAATCATTTGGTTTGGACAAATTCATATTGGACTCAGATAAGCTGGAGAATCTACATCTCAAAGACTGTACCTTCGATGTTTTTGAATTATCTGGCAAAGGAACCTTGAAAGCACTAAAGATTGACGATGTGAGTGTCATCCATCTTGATATCGGTGAGAACACGGAGAATCTCGAGATTGTAGATGTTTGTAACTTCACAATTATGTGGCCAAAATTTTATCATATGATCTCCAAGGCGTCGAATCTATGTAAGCTGAGACTGTGGGGTGTTGTATTTGACGATGAGGATGAGGTTGTGGATTTAGAGACAATTTCTTCATGCTTTCCTCGGTTAACACACCTTTCTCTGAGCTATGACTTAAAAGATGGAGTGCTTCATTACGGGTTGCAGGGTCGGTCTCTTTTGGTGAATGTGGTGATGTTGGAAGTTGGATGGACTGCTATCAACGAGCTCTTCCAAGATTGGGTTGCCGGACTGTTGGAAAGATGTCCCAATTTGAAAAGATTGATTATTCATGGGGTTGTTTCCGAGGTCAAAACCCATGAAGAGTGTCAGATTTTTGCCAAATTTACAGAATCCATTCTTCACCTGGGAAGAAAATATATGGATTTAAAGATTGAGTGTGACTATGAGTAG 1668 0.4203 MDLVQGSDCCPTSGFANGLPCSLSKHPRAKLRRFAGSKNDSFRQEYLSSALPYSPDLTISVDAGATRTEFRNKHGLCMRHSSNQNQYQPRHSFGRLFPFGCSDNRFPVTARADDRFFLPVCGNYLLVCFSIRNSSSMEYLPVEVIGNILSHVGSARDVVLASATCKKWREAWRNHLHTLSFNSNDWPIYHELNPCRLEILITQTIFQTKALQCLTIFMDDVDEFSAAPVIAWLMYTRDSLRQLLYNVKTTPNFNIIEKCGRQKLEVLALAHNSITGVEPSYKKFPCLKSLSLSYVSISALDLSLLISACPKLETLNIVSPEIAMSDSQASMELNSSSVKNFYVESFGLDKFILDSDKLENLHLKDCTFDVFELSGKGTLKALKIDDVSVIHLDIGENTENLEIVDVCNFTIMWPKFYHMISKASNLCKLRLWGVVFDDEDEVVDLETISSCFPRLTHLSLSYDLKDGVLHYGLQGRSLLVNVVMLEVGWTAINELFQDWVAGLLERCPNLKRLIIHGVVSEVKTHEECQIFAKFTESILHLGRKYMDLKIECDYE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0935 555 Gene3D Ribonuclease Inhibitor 175 545 IPR032675 -
Lele06g0935 555 SUPERFAMILY F-box domain 133 183 IPR036047 GO:0005515
Lele06g0935 555 PANTHER F-BOX PROTEIN-LIKE 138 523 - -
Lele06g0935 555 SMART fbox_2 140 181 IPR001810 GO:0005515
Lele06g0935 555 Pfam F-box-like 138 173 IPR001810 GO:0005515
Lele06g0935 555 SUPERFAMILY RNI-like 197 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0935 Lele-ChrLele06 5767159 5769868 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0935 06 5767159 5769868 Lele06g0935 06 5767159 5769868 ECH
Lele06g0935 06 5767159 5769868 Lele07g1110 07 6689574 6690807 hybridization
Lele06g0935 06 5767159 5769868 Lele08g0922 08 5802649 5803908 hybridization