Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0877 ATGGGTAACGTGAATTATCTTAGAGTGAGGCAGAGAAGGATCGAGAGAGCATTGTGTGCTGAACTCTACCAAATGGCCTCCTCTACTGCCTCCGCTGCTATCCTCTCCTCAAACCCTACCCTCTTCTCTCCCAAATTATCTTCTCCCTCCCTCTCTTTCTCCCCTTCCCTCCTCAAGTCCTTCGTCGGCCTTCGCAAACCCTCGCTCTCTGCTCGCCCCCATTCATTTTCCTCTAATCGTGCCTCCCACTCTAAGCGCAGCGTCGTTGTCAAGGCTTCTTCTAGTGATGAACTTCCACTTGTTGGAAATAAAGCACCAGATTTTGAAGCGGAGGCTGTTTTTGACCAAGAGTTTATCAACGTCAAACTTTCTGATTACATTGGAAAGAAATATGTCATCCTCTTCTTTTACCCCTTGGACTTCACATTCGTTTGCCCAACAGAAATCACTGCTTTCAGTGATCGGCACGCAGAGTTTGAGGCACTAAATACTGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCATCTCGCATGGGTTCAAACAGATAGAAAGTCTGGTGGTCTTGGGGACTTGAAGTATCCACTGATTTCTGATGTCACCAAATCAATTTCAAAATCTTATGGGGTGTTGATTCCTGATCAGGGGATTGCGTTGAGAGGATTGTTCATTATCGACAAGGAAGGAATTATCCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTGCAGGCCCTGCAGTATGTGCAGGAGAACCCAGATGAAGTGTGCCCCGCTGGGTGGAAGCCCGGTGAGAAGTCCATGAAACCAGACCCTAAACTCAGCAAGGAGTACTTCGCAGCTGTTTAG 879 0.4687 MGNVNYLRVRQRRIERALCAELYQMASSTASAAILSSNPTLFSPKLSSPSLSFSPSLLKSFVGLRKPSLSARPHSFSSNRASHSKRSVVVKASSSDELPLVGNKAPDFEAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0877 292 CDD PRX_Typ2cys 101 274 - -
Lele08g0877 292 Pfam AhpC/TSA family 101 234 IPR000866 GO:0016209|GO:0016491
Lele08g0877 292 ProSiteProfiles Thioredoxin domain profile. 99 258 IPR013766 -
Lele08g0877 292 Pfam C-terminal domain of 1-Cys peroxiredoxin 255 289 IPR019479 GO:0051920
Lele08g0877 292 SUPERFAMILY Thioredoxin-like 99 290 IPR036249 -
Lele08g0877 292 PANTHER THIOREDOXIN PEROXIDASE 93 291 - -
Lele08g0877 292 Gene3D Glutaredoxin 92 292 - -
Lele08g0877 292 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 93 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0877 Lele-ChrLele08 5550483 5553607 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0877 08 5550483 5553607 Lele08g0877 08 5550483 5553607 ECH
Lele05g1027 05 6389538 6392251 Lele08g0877 08 5550483 5553607 hybridization
Lele06g0888 06 5531033 5533742 Lele08g0877 08 5550483 5553607 hybridization