Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0888 ATGGCCTCCTCCACTGCCTCCGCTGCTATCCTCTCCTCAAATCCTACCCTCTTCTCTCCCAAATTATCTTCTCCCTCCCTCTCTCTCTCCCCTTCCCTCCTCAAGTCCTTCGTCGGCCTTCGTAAACCCTCACTCGCTGCTCGCCCCCATTCATTTTCCTCGAATCGCGCCTCCCATTCTAGGCGCAGCTTCGTTGTCAAGGCTTCCTCTAGTGATGAACTTCCTCTTGTTGGAAATAAAGCACCAGATTTTGAAGCGGAGGCTGTTTTTGACCAAGAGTTTATCAAGGTCAAACTTTCTGATTACATTGGAAAGAAATATGTCATCCTCTTCTTTTACCCCTTGGACTTCACATTCGTTTGCCCAACAGAAATCACTGCTTTCAGTGATCGGCACGCAGAGTTTGAGGCACTAAATACTGAGATATTGGGTGTTTCAGTTGACAGTGTGTTCTCGCATCTCGCATGGGTTCAAACAGATAGAAAGTCTGGTGGTCTTGGGGACTTGAAGTATCCACTGATTTCTGATGTCACCAAATCAATTTCAAAATCTTATGGCGTGTTGATTCCTGATCAGGGGATTGCGTTGAGAGGATTGTTCATTATCGACAAGGAAGGAATTATCCAGCATTCTACGATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTGCAGGCCCTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCCGCTGGGTGGAAGCCGGGTGAGAAGTCCATGAAACCAGACCCTAAACTCAGCAAGGAGTACTTCGCAGCTGTTTAG 807 0.4721 MASSTASAAILSSNPTLFSPKLSSPSLSLSPSLLKSFVGLRKPSLAARPHSFSSNRASHSRRSFVVKASSSDELPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEALNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSYGVLIPDQGIALRGLFIIDKEGIIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0888 268 Gene3D Glutaredoxin 69 268 - -
Lele06g0888 268 SUPERFAMILY Thioredoxin-like 75 266 IPR036249 -
Lele06g0888 268 CDD PRX_Typ2cys 77 250 - -
Lele06g0888 268 PANTHER THIOREDOXIN PEROXIDASE 69 267 - -
Lele06g0888 268 FunFam 2-Cys peroxiredoxin BAS1, chloroplastic 69 268 - -
Lele06g0888 268 Pfam AhpC/TSA family 77 210 IPR000866 GO:0016209|GO:0016491
Lele06g0888 268 ProSiteProfiles Thioredoxin domain profile. 75 234 IPR013766 -
Lele06g0888 268 Pfam C-terminal domain of 1-Cys peroxiredoxin 231 265 IPR019479 GO:0051920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0888 Lele-ChrLele06 5531033 5533742 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0888 06 5531033 5533742 Lele06g0888 06 5531033 5533742 ECH
Lele06g0888 06 5531033 5533742 Lele07g1065 07 6434357 6437082 hybridization
Lele06g0888 06 5531033 5533742 Lele08g0877 08 5550483 5553607 hybridization