Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0861 ATGGCCACCCAGAGTCAAACTTCCCCCTCTTCCAACGCGCTTTCCTTCATCTCCAAGGGCTGGCGGGAGGTTCGGGACTCTGCAGACGCCGATCTCCGATTGATGCGAGACCGAGCCAACACCTTCAAGAACCTTGCGACCTCATTCGACCGCGAGCTGGAGAACTTCTTCAATTCGGCTTCCCCGTTTTCCGTTCCCGCCATACGGGCTTCCCCGCAGACCGAGATTGATTTTGTAAAGAAGTTGCAGCCCAAGCTGTCCGAATTTCGACGGGCCTATTCGTCTCCCGATTTCAGTAAGAAGGTTCTCGAGAAGTGGCGGCCCAGGTCGAGGATTCGGATCGACTTGTCGGCGATAAAGGATGCAATTGTATCCGAGGTTGAGGATGGGGATGAAATTCTCGGTTTTGATAGGGGTAAGAGAGCTAGGAGATTGAACTTTAGGGAGTTCTGGGGGGAGTGGAAACGAGAGGATGAAGCGGATGGGGAAGGGCAGTCCGCTAGGGATTGGGAGCCAATTCGAGCCTTGAAGACAACGTTAAAAGAGTTTGAAAAACGGAGGTCGTCTGTAGAGATTTTTGATGGATTCAAGAATGGCGAATTTGTGGAGAAACTGAAATCGGGCTTGAAATCAATGTGCATGGAGCCTCAAGAGTCAAAGGAAGTGCCACCATTGGATGTGCCTGAACTTTTGGCCAGTTTTGTTAGGCAATCTGAGCCATTTTTGGATCAACTTGGAGTCAGAAGAGAGGTATGTGACAAGATAGTTGAAAGCTTGTATAGCAAACGCAAAAACCAACTTTTTCTGCAGTCCCTATCTGGGGAAGAATCTTCTGCTCTTGGGAATGGAAATATAAATGATGAATTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACAGGGCACCGATATGATGGTGGGTTCTGGACAGAACATGCAAAGCATGACTCATCAGGCACTGAAAGACACGTTGCAATAGTTACAACTGCCAGTCTTCCTTGGATGACAGGAACAGCTGTGAACCCTCTATTTCGAGCAGCATATCTATCACAGTCTGCAAAGCAAAAAGTCACTTTACTGGTTCCATGGCTTTGTAAGTCCGATCAAGAACTAGTTTATCCCAGTAATCTCACTTTTAGTTCACCAGAAGAGCAGGAAGTTTATATACGGAATTGGCTTGAGGAAAGGATTGGTTTCAAGCCAGACTTTAAAGTTTCCTTTTATCCTGGGAAGTTTTCTAAAGCAAGACGTAGTATTATACCTGCTGGAGACACTTCTCAATTCATACCATCTAAGGAAGCTGACATCGCTATACTGGAAGAGCCTGAACATTTGAATTGGTACCATCATGGTAAGCGTTGGACGGACAAATTCAACCACGTTGTTGGTATTGTCCACACAAATTACTTGGAATACATTAAGAGAGAGAAAAATGGGGCCCTCCAATCATTCCTTGTGAAACACATAAACAACTGGGTGACAAGAGCATACTGCCACAAGGTTCTTCGTCTTTCAGCTGCCACTCAGGATTTACCCAAGTCTGAAATTTGTAACGTTCATGGTGTGAATCCCAAGTTTCTGAAAATTGGGGAGAAGATTGCTGCAGAGAGGGAGCTTGGGCAGAAAGCCTTTACAAAAGGAGCATATTTCTTGGGAAAGATGGTGTGGGCGAAGGGATATAAGGAATTGATAGATTTATTAGCAAAGCATAAGAGTGACCTTGATGGCCTCAAGTTGGATGTATTTGGAAACGGAGAGGACGCTCATGAAGTTCAGAGTGCAGCTAGACTATTGGATTTAAATCTCAACTTTCAGAAAGGAAGAGACCATGCAGATGATTCTCTTCATGGGTACAAAGTCTTTATAAATCCTAGTATTAGTGACGTGCTCTGCACAGCTACAGCTGAGGCTCTTGCCATGGGAAAATTTGTAGTGTGTGCTGATCATCCATCAAATCAGTTCTTTATGTCATTCCCGAATTGTTTGAGTTACAAGACATCTAAAGATTTTGTGGCAAAAGTAAAAGAAGCTTTAGCCAACGAACCCCACCCTCTTACCCCTGAGCAAAGATATCAACTTTCGTGGGAAGCTGCTACTCAAAGATTCATGGAATATTCTGAGCTTGACAAAGTCTTGAAAGGAGAGAAGGATGGTGGAAAGGTTGTGGGAAGGTCCGCATCCATGCCTAATCTGACAGAAGTAGTGGATGGAGGCTTGGCTTTTGCTCACTATTGCCTCACTGGGAATGAATTCCTGAGGCTATGTACTGGAGCAATACCTGGTACACGTGACTATGACAAGCAGCACTGTAAAGACCTTCATCTCTTGCCCCCTCAGGTAGAAAATCCTATCTATGGCTGGTAA 2364 0.4522 MATQSQTSPSSNALSFISKGWREVRDSADADLRLMRDRANTFKNLATSFDRELENFFNSASPFSVPAIRASPQTEIDFVKKLQPKLSEFRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKDAIVSEVEDGDEILGFDRGKRARRLNFREFWGEWKREDEADGEGQSARDWEPIRALKTTLKEFEKRRSSVEIFDGFKNGEFVEKLKSGLKSMCMEPQESKEVPPLDVPELLASFVRQSEPFLDQLGVRREVCDKIVESLYSKRKNQLFLQSLSGEESSALGNGNINDELDLRIASVLQSTGHRYDGGFWTEHAKHDSSGTERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNLTFSSPEEQEVYIRNWLEERIGFKPDFKVSFYPGKFSKARRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQSFLVKHINNWVTRAYCHKVLRLSAATQDLPKSEICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKSDLDGLKLDVFGNGEDAHEVQSAARLLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNQFFMSFPNCLSYKTSKDFVAKVKEALANEPHPLTPEQRYQLSWEAATQRFMEYSELDKVLKGEKDGGKVVGRSASMPNLTEVVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0861 787 Pfam Glycosyl transferases group 1 549 652 IPR001296 GO:0016757
Lele08g0861 787 CDD Glycosyltransferase_GTB-type 453 655 - -
Lele08g0861 787 Coils Coil 560 580 - -
Lele08g0861 787 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 324 704 - -
Lele08g0861 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 411 521 - -
Lele08g0861 787 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 7 785 IPR044525 GO:0046481
Lele08g0861 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 522 680 - -
Lele08g0861 787 Gene3D Glycogen Phosphorylase B; 413 521 - -
Lele08g0861 787 Gene3D Glycogen Phosphorylase B; 522 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0861 Lele-ChrLele08 5440750 5445019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0861 12 616 Glycosyltransferase AT3G11670 70.244 0.0 853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0861 08 5440750 5445019 Lele08g0861 08 5440750 5445019 ECH
Lele05g1011 05 6266423 6270490 Lele08g0861 08 5440750 5445019 hybridization
Lele06g0871 06 5435168 5439422 Lele08g0861 08 5440750 5445019 hybridization