Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0871 ATGGCCACCCAGAGTCAAACTCCCCCCTCTCCCAACGCGCTTTCCTTCATCTCCAAGGGCTGGCGGGAGGTTCGGGACTCTGCAGATGCCGATCTCCGGTTGATGCGAGACCGAGCCAACACCTTCAAGAACCTTGCGACCTCATTCGACCGCGAGCTCGAGAACTTCTTCAATTCGGCTTCCCCGTTTTCCGTTCCGGCCATACGGGCTTCCCCGCAGACCGAGATCGATTTTGTAAAGAAGTTGCAGCCCAAGCTGTCCGAAATTCGACGGGCCTATTCATCTCCCGATTTCAGTAAGAAGGTTCTCGAGAAGTGGCGGCCCAGGTCGAGGATTCGGATCGACTTGTCGGCGATAAAGGATGCAATTGTACCCGAGGTTGAGGATGGGGATGAAGTTCTCGGTTTTGATAGGGGTAAGAGAGCTAGGAGATTGAACTTTAGGGAGTTCTGGGGGGAGTGGAAACGAGAGGGTGAAGCGGATGGGGAAGGGCAGTCCGCTAGGGATTGGGAGCCAATTCGAGCCTTGAAGACAACGTTAAAAGAGTTTGAAAAACGGAGGTCGTCTGTAGAGATTTTTGATGGATTCAAGAATGGCGAATTTGTGGAGAAACTGAAATCGGGCTTGAAATCGATGTGCATGGAGCCTCAAGAGTCAAAGGAAGTGCCACCATTGGATGTGCCTGAACTTTTGGCCAGTTTTGTTAGGCAATCTGAGCCATTTTTGGATCAACTTGGAGTCAGAAGGGAGGTATGTGACAAGATAGTGCAAAGCTTGTATAGCAAACGCAAAAACCAACTTTTCCTGCAGTCCCTATCTGGGGAAGAATCTTCTGCTCTTGGGAATGGAAATATAAATGATGAATTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACAGGTCACCGATATGATGGTGGGTTCTGGACAGAACATGCAAAGCATGACTCATCAGGCACTGAAAGATACGTTGCAATAGTTACAACTGCCAGTCTTCCTTGGATGACAGGAACAGCTGTGAATCCACTATTTCGAGCAGCATATCTATCACAGTCTGCAAAGCAAAAAGTCACTTTACTGGTTCCATGGCTTTGTAAGTCCGATCAAGAACTAGTTTATCCCAGCAATCTCACTTTTAGTTCACCAGAAGAGCAGGAAGTTTATATACGGAATTGGCTTGAGGAAAGGATTGGTTTCAAGCCAGACTTTAAAGTTTCCTTTTATCCTGGGAAGTTTTCTAAAGCAAGACGTAGTATTATACCTGCTGGAGACACTTCTCAATTCATACCATCTAAGGAAGCTGACATCGCTATACTGGAAGAACCTGAACATTTGAATTGGTACCATCATGGTAGGCGTTGGACGGACAAATTCAACCACGTTGTTGGTATTGTCCACACAAATTACTTGGAATACATCAAGAGAGAGAAAAATGGGGCCCTCCAAGCATTCCTTGTGAAACACATAAACAACTGGGTGACAAGAGCATACTGCCACAAGGTTCTTCGTCTTTCAGCTGCCACTCAGGATTTACCCAAGTCTGAAATTTGTAACGTTCATGGTGTGAATCCCAAGTTTCTGAAAATTGGGGAGAAGATTGCCGCAGAGAGGGAGCTTGGGCAGAAAGCGTTTACAAAAGGAGCATATTTCTTGGGAAAGATGGTGTGGGCGAAGGGATATAAGGAATTGATAGATTTATTAGCAAAGCATAAGAGTGACCTTGATGGCCTCAAGTTGGATGTATTTGGAAATGGAGAGGACGCTCATGAAGTTCAGAGTGCAGCTAGGCTATTGGATTTAAATCTCAACTTTCAGAAAGGAAGAGACCATGCAGATGATTCTCTTCATGGGTACAAAGTCTTTATAAATCCTAGTATTAGTGACGTGCTCTGCACGGCTACAGCTGAAGCTCTTGCCATGGGAAAATTTGTAGTGTGTGCTGATCATCCGTCAAATCAGTTCTTTATGTCATTCCCGAATTGTTTGACTTACAAGACATCTGAAGATTTTGTGGCAAAAGTAAAAGAAGCTTTAGCCAATGAACCACACCCTCTTACCCCTGAGCAAAGATATCAACTTTCGTGGGAAGCTGCTACTCAAAGATTCATGGAATATTCTGAGCTTGACAAAGTCTTGAAAGGAGAGAAGGATGGTGGAAAGGTTGTGGGAAGGTCCGCATCAATGCCTAATCTGACGGAAGTAGTGGATGGAGGCTTGGCTTTTGCTCATTATTGCCTCACTGGGAATGAATTCCTGAGGCTATGTACTGGAGCAATACCTGGTACACGTGACTATGACAAGCAGCACTGTAAAGACCTTCATCTCTTGCCCCCTCAGGTAGAAAATCCTATCTATGGCTGGTAA 2364 0.456 MATQSQTPPSPNALSFISKGWREVRDSADADLRLMRDRANTFKNLATSFDRELENFFNSASPFSVPAIRASPQTEIDFVKKLQPKLSEIRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKDAIVPEVEDGDEVLGFDRGKRARRLNFREFWGEWKREGEADGEGQSARDWEPIRALKTTLKEFEKRRSSVEIFDGFKNGEFVEKLKSGLKSMCMEPQESKEVPPLDVPELLASFVRQSEPFLDQLGVRREVCDKIVQSLYSKRKNQLFLQSLSGEESSALGNGNINDELDLRIASVLQSTGHRYDGGFWTEHAKHDSSGTERYVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSNLTFSSPEEQEVYIRNWLEERIGFKPDFKVSFYPGKFSKARRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGRRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCHKVLRLSAATQDLPKSEICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKSDLDGLKLDVFGNGEDAHEVQSAARLLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNQFFMSFPNCLTYKTSEDFVAKVKEALANEPHPLTPEQRYQLSWEAATQRFMEYSELDKVLKGEKDGGKVVGRSASMPNLTEVVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0871 787 Gene3D Glycogen Phosphorylase B; 418 521 - -
Lele06g0871 787 Gene3D Glycogen Phosphorylase B; 522 656 - -
Lele06g0871 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 411 521 - -
Lele06g0871 787 Coils Coil 560 580 - -
Lele06g0871 787 Pfam Glycosyl transferases group 1 549 681 IPR001296 GO:0016757
Lele06g0871 787 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 522 680 - -
Lele06g0871 787 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 9 785 IPR044525 GO:0046481
Lele06g0871 787 CDD Glycosyltransferase_GTB-type 452 655 - -
Lele06g0871 787 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 325 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0871 Lele-ChrLele06 5435168 5439422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0871 12 616 Glycosyltransferase AT3G11670 69.593 0.0 847
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0871 06 5435168 5439422 Lele06g0871 06 5435168 5439422 ECH
Lele06g0871 06 5435168 5439422 Lele07g1049 07 6334181 6338270 hybridization
Lele06g0871 06 5435168 5439422 Lele08g0861 08 5440750 5445019 hybridization