Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0860 ATGGGGATTGAGTCAGGAACACAAGTGAAAGAAGGAGGTTGGTGGAGCTGCCTCAAGAATATGCCTCACAAGTCAAAGTCCAGTGTCATGAGCATGGTGGAGGGCATAAAGAAGACTGGAAAAGACGATCCAAGGAGAATCACTCACTCTCTAAAAGTAGGAATAGCTCTCACACTAGTCTCTCTCATATACTACTGGAGGCCTCTTTATGATGGCTTTGGTGTTGCAGGAATGTGGGCTGTTCTCACTGTCGTTGTAATCTTTGAGTTCACCGTAGGTGCAACCTTGAGTAAAGGCATAAATAGAGGATGTGCAACATTAGTAGCAGGAGCTCTGGGATTTGGAAGCCAACACTTTGCTATTTTATTTGGAGAAAAAGGAGAGCCTGTGGTGCTCGGGACCCTTGTCTTCATTCTGGCGGCAGGCTCTACATTTTCGAGGTTTTTCCCAAAGATAAAGGCAAGATATGATTATGGGATGGTGATATTTATTTTGACATTCAGTATGGTGGCAGTATCAGGGTACAGAATAGAGAAACTCTTCGAGCTTGCTCATCAAAGGTTCTCAACCATTTTAATAGGAGGAGCCACATGCATGATGATATCCTTATTCGTTTGCCCAGTTTGGGCAGGCGAGGACCTTCACAAGTTGGTCTCTTCCAACGTTGAGAAGCTCGCTAATTACCTCGAAGGTTTCGAAGGTGAATACTTTCAGTGCTCAGAGGATAAAGCAAAACCTGAAAAATCAAAACTTGAAGGATATAAGAGTGTTCTGAACTCCAAAGCAACTGAAGAGTCGTTGGCAAATCTGGCAAGGTGGGAACCAGGACATGGCCGATTTCGTTTTCGTCACCCTTGGAAACAATACCTCAAGATCGGAGCACTTTCTCGGAAATGTGCTTACAGGATGGAAGCTCTCAGTGGTTACCTTAGCTCTGAAATCCAAGTGTGTTTAGAATTTAGTCGGAAAGTTCAAGAATCGTGCACGAAGATGACTTCTGAATCAAGCATCGCACTGAGATCATTATCTTTGTCCATTAAAACGATGAAAGAGCCTTGTGAAGTAAAACCCCACCTGGAGAGTTCTAAGGCCGCAGTTAAAGACCTGGAAATCGCAGTCCAAACTGCTTCCTTAGAGGACATGGACGTCTTAGCAATAGTTCCACTTGCCACGGTGGCATCCATTCTCGTAGAAATCACAAAGACAGTCGAGGAAATCTATGAAGCTGTCTCTGAACTCTCCAACTTGGCTCGTTTCGACAAAGTGGAGCCCAATGTCTCGCCGGAGAAGCCACACTTACTTCATCGAGGTGTCATCAATCCCGTCGTAGACGGTGGTGGTGCAGACGATCATATTGAAATTATTACCATCCAAGATTCCGACACTGCAGGGAAGGAACCAAAGGGTGCATCTTGTAAATAG 1422 0.4487 MGIESGTQVKEGGWWSCLKNMPHKSKSSVMSMVEGIKKTGKDDPRRITHSLKVGIALTLVSLIYYWRPLYDGFGVAGMWAVLTVVVIFEFTVGATLSKGINRGCATLVAGALGFGSQHFAILFGEKGEPVVLGTLVFILAAGSTFSRFFPKIKARYDYGMVIFILTFSMVAVSGYRIEKLFELAHQRFSTILIGGATCMMISLFVCPVWAGEDLHKLVSSNVEKLANYLEGFEGEYFQCSEDKAKPEKSKLEGYKSVLNSKATEESLANLARWEPGHGRFRFRHPWKQYLKIGALSRKCAYRMEALSGYLSSEIQVCLEFSRKVQESCTKMTSESSIALRSLSLSIKTMKEPCEVKPHLESSKAAVKDLEIAVQTASLEDMDVLAIVPLATVASILVEITKTVEEIYEAVSELSNLARFDKVEPNVSPEKPHLLHRGVINPVVDGGGADDHIEIITIQDSDTAGKEPKGASCK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0860 473 Pfam Aluminium activated malate transporter 39 414 IPR020966 GO:0015743
Lele08g0860 473 Coils Coil 359 379 - -
Lele08g0860 473 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 22 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0860 Lele-ChrLele08 5433878 5435781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0860 1 459 Miscellaneous Gene Families AT3G11680 55.224 8.97e-177 503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0860 08 5433878 5435781 Lele08g0860 08 5433878 5435781 ECH
Lele05g1010 05 6261947 6263944 Lele08g0860 08 5433878 5435781 hybridization
Lele06g0870 06 5430629 5432502 Lele08g0860 08 5433878 5435781 hybridization