Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1010 ATGGGAATCGAGCCAGGAACACAAGTGAAAGGAGGAGGTTGGTGGAGCTGCCTCAAGAATTTGCCATCCAAGTCAAAGTCCAATGTTATCCACTTCGCAGAGGGCATAAAGAAGACTGGAAAAGATGACCCAAGGAGAATCACTCACTCACTAAAAGTAGGATTAGCTCTCACACTAGTCTCTCTCATATACTACTGGAGGCCTCTTTATGATGGCTTTGGTGTTGCAGGAATGTGGGCTGTTCTCACTGTCGTTGTAGTCTTTGAGTTCACCGTAGGTGCAACCTTGAGTAAAGGCATAAATAGAGGATGTGCAACATTAGTAGCAGGAGCTCTGGGATTTGGAAGCCAACACTTGGCCATTTTATTTGGAGAAAAAGGAGAGCCTGTTGTACTCGGGAACCTTGTCTTCATTCTGGCGGCGGGCTCTACATTTTCGAGGTTTTTCCCGAAGATAAAAGCAAGATATGATTATGGGATGTTGATATTTATATTGACATTCAGCCTGGTGACAGTATCAGGGTACAGAATAGAGAAACTTTTTGAGCTTGCTCATCAAAGGTTCTCAACCATTTTAATAGGAGGAGCCACGTGCATGATGATATCCTTATTCGTTTGCCCAGTTTGGGCAGGCGAAGATCTTCACAAGTTGGTCTCTTCCAATATCGAAAAGCTCGCTAATTACCTCGAAGGTTTCGAAGGTGAATATTTTCAGTGCTCAGAGGATGAAGCAAAGCCTGAAAAATCAAAACTTGAAGGATATAAGAGTGTTCTGAACTCCAAAGCATCTGAAGAGTCGTTGGCAAATCTGGCAAGGTGGGAACCAGGACATGCCCGATTTCGTTTTCGTCACCCTTGGAAACAATACCTCAAGATTGGAGCACTTTCTCGGAAATGTGCTTACAAGATGGAAGCTCTTAGTGGTTACCTTAGCTCTGAAATCCAAGTGTGTTCAGAATTCAGTCGGAAAGTTCAAGAATCGTGCACGAAGATGACTTCTGAATCAAGCATCGCACTGAGAGCATTATCTTTGTCCATTAAAACTATGAAAGAGAGTTGTGAAGTAAAACCCCACCTGGAGAATTCTAAGGCCGCAGTTAATGACCTGGAAATCGCAGTTCAAACTGCTTCCTTAGAGGACATAGACGTCTTAGCAATAGTTCCACTTGCCACGGTGGCATCCATTCTCGTAGAAATCACAAAGACAGTCGAGGAAATCTATGAAGCTGTCTCTGAACTATCCAACTTGGCTCATTTCGACAAAGTGGACCCCAATGTCTCGCCGGAGAAGCCACACTTACTTCATCGAGGTGTTATAAATCCTGTCGTAGACGGTGGTAGTGAAGATGATCATATTGAAATTATTACCATCCAAGATTCCAACACTAGGAAGGAAATTGCAGCACCAAAATCCATACCAAAGGGTGCATCTTGTAAATAG 1440 0.4347 MGIEPGTQVKGGGWWSCLKNLPSKSKSNVIHFAEGIKKTGKDDPRRITHSLKVGLALTLVSLIYYWRPLYDGFGVAGMWAVLTVVVVFEFTVGATLSKGINRGCATLVAGALGFGSQHLAILFGEKGEPVVLGNLVFILAAGSTFSRFFPKIKARYDYGMLIFILTFSLVTVSGYRIEKLFELAHQRFSTILIGGATCMMISLFVCPVWAGEDLHKLVSSNIEKLANYLEGFEGEYFQCSEDEAKPEKSKLEGYKSVLNSKASEESLANLARWEPGHARFRFRHPWKQYLKIGALSRKCAYKMEALSGYLSSEIQVCSEFSRKVQESCTKMTSESSIALRALSLSIKTMKESCEVKPHLENSKAAVNDLEIAVQTASLEDIDVLAIVPLATVASILVEITKTVEEIYEAVSELSNLAHFDKVDPNVSPEKPHLLHRGVINPVVDGGSEDDHIEIITIQDSNTRKEIAAPKSIPKGASCK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1010 479 Coils Coil 359 379 - -
Lele05g1010 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 23 424 - -
Lele05g1010 479 Pfam Aluminium activated malate transporter 39 414 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1010 Lele-ChrLele05 6261947 6263944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1010 1 459 Miscellaneous Gene Families AT3G11680 56.503 2.18e-179 510
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1010 05 6261947 6263944 Lele05g1010 05 6261947 6263944 ECH
Lele05g1010 05 6261947 6263944 Lele07g1048 07 6329383 6331324 hybridization
Lele05g1010 05 6261947 6263944 Lele08g0860 08 5433878 5435781 hybridization