Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0825 ATGGAGCAAGACACAAAAAGCTGGGCAGCCCCTCTGCTGGAATCGTCTCCTTCTGGAACAGCTTCTAGGCTTCAAACTCTGGGAAACATCATAGTCTCTATAGTTGGTACCGGTGTACTGGGATTGCCTTTTGCTTTTCCGATAGCTGGGTGGCTTGCTGGCTCACTGGGAGTTGCCATCGTCGGCATGACCACCTACTATTGCCTGCTCCTCCTTGCTTTGTGCAGAGAGAAGTTGGCAGCAGTTGGATCATCAGTCGAAGCAAAAACATATGGAGATTTGGGTTATAAGAGCTTTGGAACCTTTGGTCGATATCTACCAGAATTTCTTATTTTGTTAGCACAGAGTGGAGGTTCCGTTGCATATTTGGTATTCATTGGCCAAAACATCCAATCCATTTTCCAAAAGCAAAGTGAAATTTCTTATTTTGTTAGCACAGAGTGGAGGTTCCGTTGCATAATTGGAGGCATGGCATTTTTTTGTTTTGAAGGGTTTGGGATGACATTGGCCTTGCAGAATTCTATGCAGCACAGAGCTAAATTCCCAAGATTGCTGGCTCAGACGTTTGGTGGGATAACACTTGTGTACATTCTTTTTGGGTTTTTTGGTTACATGGCGTATGGTGATGAAACTAGAGATATTGTGACCCTCAATCTCCCCAGGAATTGGTCATCTCTAGCAGTGCAGGAATGCAGACTAACTATACTAGACATGGCTTATCGACTCTGA 729 0.4444 MEQDTKSWAAPLLESSPSGTASRLQTLGNIIVSIVGTGVLGLPFAFPIAGWLAGSLGVAIVGMTTYYCLLLLALCREKLAAVGSSVEAKTYGDLGYKSFGTFGRYLPEFLILLAQSGGSVAYLVFIGQNIQSIFQKQSEISYFVSTEWRFRCIIGGMAFFCFEGFGMTLALQNSMQHRAKFPRLLAQTFGGITLVYILFGFFGYMAYGDETRDIVTLNLPRNWSSLAVQECRLTILDMAYRL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0825 242 Pfam Transmembrane amino acid transporter protein 20 136 IPR013057 -
Lele08g0825 242 Pfam Transmembrane amino acid transporter protein 153 233 IPR013057 -
Lele08g0825 242 PANTHER AMINO ACID TRANSPORTER 15 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0825 Lele-ChrLele08 5185010 5186827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0825 1 229 Organic Solute Cotransporters AT3G11900 49.488 5.11e-84 255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0975 05 6022723 6025263 Lele08g0825 08 5185010 5186827 hybridization
Lele06g0836 06 5171968 5177390 Lele08g0825 08 5185010 5186827 hybridization