Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0975 ATGGAACAAGACACAAAAAGCCACGCAACTCCTCTGCTGGAATCGTCTCTTTCTGGAACAGCTTCTAGATTTCAAACTCTGGGAAATATCATAGTCTCTATAGTTGGTACCGGTGTGCTGGGATTGCCTTTTGCTTTTCGGATCGCTGGTTGGCTTGCTGGCTCACTGGGAGTTGCCCTCGTTGGCATAACCTCCTACTATTGCATGCTTCTCCTTGTTTTGTGCAGAGAGAAGTTGGCAGCAGATGGATCATCAGTCGAAGCTAAAACATATGGCGATTTGGGTTATAAGAGCTTTGGAACCTTTGGTCGATATCTGTCAGAATTTCTTATTTTGTTAGCACAGACTGGAGGTTCCGTTGCATATTTGGTATTCATTGGCCAAAACATCCAATCTATTTTCCAAAAGCACGGTCTCGCATTCACATCCTATATATTTTTGTTAGTGCCAGTTGAAATTGGATTATCATGGATAGGGAGCTTATCTGCTTTAGCACCATTTAGCATTTTTGCTGATATTTGCAATGTCCTAGCAATGGGAATTGTGGTGAATGAAGATATACAGCAAGCAGGAAGTGGTGAATTCTCATTTGAACAGATGACCGCAATCACATCCAACTTAGGGGGACTGCCTTTTGCAGGAGGCATGGCAGTCTTTTGTTTTGAAGGGTTTGGGATGACACTGGCCTTGGAGAATTCTATGCAGGACAGAGCTAAATTCCCGAGATTGCTGGCACAGACCTTTGGTGGGATAACACTTGTGTACATTCTTTTTGGTTTTTTTGGTTACATGGCCTATGGTGATGAAACTAGAGACATTGTGACCCTCAATCTCCCCAGGAATTGGTCATCTCTAGCAGTGCAGGTCGGATTATGCCTGGGGCTTGTATTCACATTCCCAATCATGCTACACCCTATTAATGAAATTTTGGAGGGAAAGCTGAAAACGATCAAATGGTTTTACAGGCCTTTCCACAGGGACAACAATGATTCAACGACCAGACTGGGAAAGATTGGGATCTACTTAAGTCGTGCTCTTGTGGTGGTTGTGTTGGCAATCTTGGCTTCATGCGTGCCAGTTTTTGGCGTATTTGCCTCATTTGTGGGGAGTACTGTGTGTGCATTGATCTCATTTGTTTTGCCAGCTACATTTCACCTAAAGCTATTTGGTTCTTCCCTAAATATTTGGCAGAAAGCTTTGGATTCTTTTGTACTGTTCTGTGGATTATTTTTTGCTGCTTATGGCACGTACAATACCATAGTTGGAGTTTGA 1272 0.43 MEQDTKSHATPLLESSLSGTASRFQTLGNIIVSIVGTGVLGLPFAFRIAGWLAGSLGVALVGITSYYCMLLLVLCREKLAADGSSVEAKTYGDLGYKSFGTFGRYLSEFLILLAQTGGSVAYLVFIGQNIQSIFQKHGLAFTSYIFLLVPVEIGLSWIGSLSALAPFSIFADICNVLAMGIVVNEDIQQAGSGEFSFEQMTAITSNLGGLPFAGGMAVFCFEGFGMTLALENSMQDRAKFPRLLAQTFGGITLVYILFGFFGYMAYGDETRDIVTLNLPRNWSSLAVQVGLCLGLVFTFPIMLHPINEILEGKLKTIKWFYRPFHRDNNDSTTRLGKIGIYLSRALVVVVLAILASCVPVFGVFASFVGSTVCALISFVLPATFHLKLFGSSLNIWQKALDSFVLFCGLFFAAYGTYNTIVGV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0975 423 Pfam Transmembrane amino acid transporter protein 20 420 IPR013057 -
Lele05g0975 423 PANTHER AMINO ACID TRANSPORTER 16 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0975 Lele-ChrLele05 6022723 6025263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0975 1 423 Organic Solute Cotransporters AT3G11900 63.318 0.0 554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0975 05 6022723 6025263 Lele07g1014 07 6088953 6091499 hybridization
Lele05g0975 05 6022723 6025263 Lele08g0825 08 5185010 5186827 hybridization