Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0702 ATGGAAACTCGAAAGTTATCTCTACAGTGCGTTTATAGATTACAATGGCTAAATTCTAACGAAGTTTGTTCCTGCCATGTTGCTGTTGATTTGAAGGACCGAGCTAATGAGATATATAAGAGGGTTGAAGATCAGAAGTCTAGTAGAGGAAGAAATCAGATGCATTATTGGCTGCTTGCCTCTACATTGCTTAAGGAAATTGGCCAAGCAAAACAGTACATAGTGAAACAACTGGGTTTTGAGAAAGGTCAGTCAGTGGAAATGGGAACAATACATGCTGGGGATTTTATGAGGCGGTTTTGTTCTAATCTTGGTATGAGCAATCAAGCTGTTAAAGCTGCTCAAGAAGCAGTGCAGAAATCAGAAGAGTTTGATATAAGGAGGAGCCCCATATCTATTGCTGCGGCTGTTATATATATCATAACTCAACTTTCAGAAGATAAGAAACCTCTAAAAGTTTATGGAAAGATTTTTACAACAATAGTTGTTCGATTCAATCTTAGGCTTCAATCATTGGTTAGTTCCACCAGGCCCTCCAAAACTGATCATAAGTTCTTTGATGAAACCAATGAGCAGTGA 579 0.3834 METRKLSLQCVYRLQWLNSNEVCSCHVAVDLKDRANEIYKRVEDQKSSRGRNQMHYWLLASTLLKEIGQAKQYIVKQLGFEKGQSVEMGTIHAGDFMRRFCSNLGMSNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSEDKKPLKVYGKIFTTIVVRFNLRLQSLVSSTRPSKTDHKFFDETNEQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0702 192 CDD CYCLIN 91 152 IPR013763 -
Lele08g0702 192 Gene3D - 92 182 - -
Lele08g0702 192 SUPERFAMILY Cyclin-like 91 157 IPR036915 -
Lele08g0702 192 Pfam Transcription factor TFIIB repeat 88 152 IPR013150 GO:0017025
Lele08g0702 192 PRINTS Transcription initiation factor IIB signature 63 78 IPR000812 GO:0006352|GO:0070897
Lele08g0702 192 PRINTS Transcription initiation factor IIB signature 128 144 IPR000812 GO:0006352|GO:0070897
Lele08g0702 192 PRINTS Transcription initiation factor IIB signature 96 114 IPR000812 GO:0006352|GO:0070897
Lele08g0702 192 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 63 150 IPR000812 GO:0006352|GO:0070897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0702 Lele-ChrLele08 4307593 4311595 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0702 08 4307593 4311595 Lele08g0702 08 4307593 4311595 ECH
Lele05g0850 05 5187521 5191115 Lele08g0702 08 4307593 4311595 hybridization
Lele06g0702 06 4289412 4293148 Lele08g0702 08 4307593 4311595 hybridization