Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0663 ATGAACTCAAAGGTCATAGCCACTGTGCTTGCGGTCTTCTCCATAATATTTGCCTTCAACTCCGAACTATTTTTTGGGCCTCCTTCAATTCCGGGTTCCCAGGATCTGCTCCACACCGCTCAGATACTCCATGTGCCCGGAGCCGTCGGGCCGGAGAGCCTCGTCTTCGATAGCAACGGGGAGGGCCCGTACACCGGCGTCGCCGACGGACGAATTCTCAAATGGCAAGGAGAGGGTCGAGGCTGGACTGATTTTGCCTTCACCACTTCTAATAGGACGGAATGTACACGTCCATTTGCACCAGAATTGGAGCATATTTGTGGGAGGCCACTTGGACTGAGTTTTGATAAGAAAAGTGATCTGTACATTGCTGATGCCTACCTTGGCCTTCAAGTCGTAGGACCAACAGGTGGTTTAGCCACCCCTTTGGTCACGCAAGTTGAGGGCCAACCCTTGCGCTTCACCAATAGCATGGACATCAGTGAGGACGAAGATGTCATTTACTTCACTGATTCTAGCACTGCCTTCTACAGAAGGGAATTCATGAGTTCAATTCTTAGTGGGGACAAGACTGGTCGATTAATGAAATATGATAAGTCAACCAAAGAAGTGACAGTGTTGATGAGGGGGCTTGGTTTTGCCAACGGAGTTTCACTGAGCAAAGACGGTTCATTTCTGGTGGTGGCAGAAACCTCTGCACGCAGGATCCTCAGGCTCTGGCTTCGTGGACCTAAAGCCGGTCAAGTAGACACATTTGCTGAGCTTCCCGGTTTGCCAGATAATATAAGAAGGAACTCAAAAGGTGAGTTTTGGGTGGCTTTTCATGCAAAAGCAAGTCCTTTCGCCAGATTGGTTTCTTCAAAGTCATGGGCTGGAAATGCAATGCTAAATCTTCCACTCAACTTCAAACAACTGCACGCATCGTTCACTGGGTGGAAGCCTCACTCCTCTATTATAAAGCTGAGTGACAAAGGAGAAATTTTGCGAGTGTTGGAAGATTGTGAAGGAAAAGCCTTGAGGTTTGCTAGCGAAGTGGAGGAGAAGGATGGGGAAATTTGGATTGGTTCAGTGTTAATGCCCTTCATCGGCATTTATAAGCTATGA 1104 0.481 MNSKVIATVLAVFSIIFAFNSELFFGPPSIPGSQDLLHTAQILHVPGAVGPESLVFDSNGEGPYTGVADGRILKWQGEGRGWTDFAFTTSNRTECTRPFAPELEHICGRPLGLSFDKKSDLYIADAYLGLQVVGPTGGLATPLVTQVEGQPLRFTNSMDISEDEDVIYFTDSSTAFYRREFMSSILSGDKTGRLMKYDKSTKEVTVLMRGLGFANGVSLSKDGSFLVVAETSARRILRLWLRGPKAGQVDTFAELPGLPDNIRRNSKGEFWVAFHAKASPFARLVSSKSWAGNAMLNLPLNFKQLHASFTGWKPHSSIIKLSDKGEILRVLEDCEGKALRFASEVEEKDGEIWIGSVLMPFIGIYKL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0663 367 Gene3D - 34 367 IPR011042 -
Lele08g0663 367 PANTHER STRICTOSIDINE SYNTHASE-RELATED 10 360 - -
Lele08g0663 367 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 35 367 - -
Lele08g0663 367 SUPERFAMILY Calcium-dependent phosphotriesterase 13 365 - -
Lele08g0663 367 Pfam Strictosidine synthase-like, N-terminal 36 75 - -
Lele08g0663 367 Pfam Strictosidine synthase 156 243 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0663 Lele-ChrLele08 4047943 4050828 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0663 08 4047943 4050828 Lele08g0663 08 4047943 4050828 ECH
Lele05g0818 05 4901854 4904766 Lele08g0663 08 4047943 4050828 hybridization
Lele06g0668 06 4003662 4006517 Lele08g0663 08 4047943 4050828 hybridization