Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0668 ATGAACTCGAAGGTCATAGCCACTGTGTTTGCCGTCTTCTCCATAATATTTGCCTTCAACTCCAAACTATTTTTTGGGCCACCTTCCATTCCGGGTTCCCAGGACCTGCTCCACACCGCTCAGATATTCCATGTCCCCGGAGCCGTCGGACCGGAGAGCCTCGTCTTCGATAGCAACGGGGAGGGCCCGTACACAGGCGTCGCCGACGGACGAATTCTCAAATGGCAAGGAGAGGGTCGAGGCTGGACTGATTTTGCCTTCACCACTTCTAATAGGACGGAATGTACTCGTCCATTTGCACCAGAATTGGAGCATATTTGTGGGAGGCCACTTGGACTGAGTTTTGATAAGAAAAGTGGAGATCTGTACATTGCTGATGCCTACCTTGGCCTTCAAGTGGTAGGACCAACAGGTGGTTTAGCCACCCCTTTGGTCACACAAGTTGAGGGCCAACCCTTGCGCTTCACCAATAGCATGGACATCAGTGAGGACGAAGATGTCATTTACTTCACTGATTCTAGCACTGCCTTCTACAGAAGGGAATTCATGAGTTCAATTCTTAGTGGGGACAAGACTGGTCGATTAATGAAATATGATAAGTCGACCAAAGAAGTGACAGTGTTGATGAGGGGGCTTGGTTTTGCCAACGGAGTTTCACTGAGCAAAGACGGTTCATTTCTGGTGGTGGCAGAAACCTCTGCACGCAGGATCCTGAGGCTCTGGCTTCGTGGACCTAACCCCGGTCAATTAGACACATTTGCTGAGCTTCCCGGTTTGCCAGATAATATAAGAAGGAACTCAAAAGGTGAGTTTTGGGTGGCTTTGCATGTAAAAGCAAGTCCTTTCGCCAGATTGGTTTCTTCAAAGTCATGGGCTGGAAATGCGATGCTAAATCTTCCACTCAACTTCAAACAACTGCACGCATCGTTCACTGGGTGGAAGCCTCACTCCTCTATTATAAAGCTGAGTGATAAAGGAGAAATTTTGCAAGTGTTGGAAGACTGTGAAGGAAAAGCCTTGAGGTTTGCTAGTGAAGTGGAGGAGAAGGATGGGAAAATTTGGATTGGTTCAGTGTTAATGCCCTTCATCGGCATTTATAAGCTACGAGTATGA 1113 0.478 MNSKVIATVFAVFSIIFAFNSKLFFGPPSIPGSQDLLHTAQIFHVPGAVGPESLVFDSNGEGPYTGVADGRILKWQGEGRGWTDFAFTTSNRTECTRPFAPELEHICGRPLGLSFDKKSGDLYIADAYLGLQVVGPTGGLATPLVTQVEGQPLRFTNSMDISEDEDVIYFTDSSTAFYRREFMSSILSGDKTGRLMKYDKSTKEVTVLMRGLGFANGVSLSKDGSFLVVAETSARRILRLWLRGPNPGQLDTFAELPGLPDNIRRNSKGEFWVALHVKASPFARLVSSKSWAGNAMLNLPLNFKQLHASFTGWKPHSSIIKLSDKGEILQVLEDCEGKALRFASEVEEKDGKIWIGSVLMPFIGIYKLRV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0668 370 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 35 369 - -
Lele06g0668 370 Pfam Strictosidine synthase-like, N-terminal 36 75 - -
Lele06g0668 370 Gene3D - 35 369 IPR011042 -
Lele06g0668 370 SUPERFAMILY Calcium-dependent phosphotriesterase 13 368 - -
Lele06g0668 370 Pfam Strictosidine synthase 157 244 IPR018119 GO:0009058|GO:0016844
Lele06g0668 370 PANTHER STRICTOSIDINE SYNTHASE-RELATED 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0668 Lele-ChrLele06 4003662 4006517 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0668 06 4003662 4006517 Lele06g0668 06 4003662 4006517 ECH
Lele06g0668 06 4003662 4006517 Lele08g0663 08 4047943 4050828 hybridization