Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0578 ATGTTTGGCGCACTTGCTGTATTCAACTCTCTCAAGCCTTTTCGTCTCCTTTGCTCCCAGACCTTGGACGCTGCAACTAGCAATATGAGGTTGATTCAAGCTTGTACTCTGTGTGTTTGGCTTTTCATCTCTGTGGTACTGAATCCAGAGCCATTGTTGCTATTGGATGCTTCAAGTGACTGTGATTTTCCGGCCATATTCAACTTTGGAGACTCCAACTCTGACACCGGCGGTCTCTCTGCCGCCTTCGGCCAACCCGGTCCTCCTCACGGCGAGTCCTTCTTCCACCACCCTGCCGGACGCTTCTGCGACGGCCGTCTTGTCATAGATTTCATAGCTAAGGAGCTGGGTCTGCCATATTTGAATGCTTTCCTTGATTCGGTTGGCTCAAATTTTACGCATGGAGCCAACTTCGCCACAGCCGGATCCACCATCAGGCCTCAGAACACAACCCTTCATCAGGTTGGTGGGTTCAGTCCTTTCTCTTTGGACGTTCAGTTCAATCAATTCAGTGATTTCCAGCGCAGATCTCAAACTTTTCGCAATAAAGGAGGATTGTATACAACATTGCTACCAAAAGCACAAGACTTTTCTCGTGCATTATACACTTTCGATATTGGGCAGAACGATTTGACATCAGGATATTTCCATAACATGTCCACTGATCAAGTCAAAGCATATGTTCCTGATCTTTTAGCACAGTTCAAGAACATTGTGAAGTATGCATATGATCATGGAGGAAGGTCGTTCTGGATACACAACACAGGTCCAGTTGGTTGTTTACCATACATAATGGACCTTCATCCATTGAAAACAACTCAGGTGGATAAAGCTGGATGTGCTATCCCTTACAATGAGGTCGCTCGATTCTTCAATCGTCGGTTAAAAGCGGTTGTGCTTCAACTCAGAGAGAAGCTTCCCTTGGCTGCAATCACCTACGTTGATGTCTACTCTGTCAAGTACTCCCTCATCAGCCAAGCAAAGAAGCATGGTTTTATGGAACCACTGATAGCTTGCTGTGGGCATGGCGGGAAGTACAACTTCAACTCACATATTGGATGTGGAGGGAAGATAAAGGTTCGTGGGAAAGAGGTGTTAGTGGGAAAAGCATGCAAGGATCCATCGGTTTGGGTTAATTGGGATGGGGTGCACTACACTCAGGCTGCTAATAAATGGGTATTTGAGCAAATTGTGGATGGATCATTTTCTGATCCTCCTTTTCCTTTGAACAGGGCATGTCATAGGCACCACAATTGA 1257 0.4606 MFGALAVFNSLKPFRLLCSQTLDAATSNMRLIQACTLCVWLFISVVLNPEPLLLLDASSDCDFPAIFNFGDSNSDTGGLSAAFGQPGPPHGESFFHHPAGRFCDGRLVIDFIAKELGLPYLNAFLDSVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFSDFQRRSQTFRNKGGLYTTLLPKAQDFSRALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDLLAQFKNIVKYAYDHGGRSFWIHNTGPVGCLPYIMDLHPLKTTQVDKAGCAIPYNEVARFFNRRLKAVVLQLREKLPLAAITYVDVYSVKYSLISQAKKHGFMEPLIACCGHGGKYNFNSHIGCGGKIKVRGKEVLVGKACKDPSVWVNWDGVHYTQAANKWVFEQIVDGSFSDPPFPLNRACHRHHN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0578 418 CDD SGNH_plant_lipase_like 64 401 IPR035669 -
Lele08g0578 418 SUPERFAMILY SGNH hydrolase 66 398 - -
Lele08g0578 418 Gene3D SGNH hydrolase 55 400 IPR036514 -
Lele08g0578 418 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 48 406 - -
Lele08g0578 418 FunFam GDSL esterase/lipase At1g09390 55 402 - -
Lele08g0578 418 Pfam GDSL-like Lipase/Acylhydrolase 66 397 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0578 Lele-ChrLele08 3482994 3486516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0578 64 416 Acyl Lipid Metabolism Gene Families AT4G10950 28.962 1.16e-32 125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0737 05 4321323 4322895 Lele08g0578 08 3482994 3486516 hybridization
Lele06g0572 06 3437081 3441023 Lele08g0578 08 3482994 3486516 hybridization