Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0572 ATGCCTGTTCGTCTCCTTTACTCCCAGACCTTGGACGCTGCAACTAGCAATATGAGGTTGATTCAAGCTCGTACTCTGTGTGTTTGGCTTTTCATCTCTGTGGTACTGAATCCAGAGCTATTGTTGCTATCGGATGCTTCAAGTGACTGTGACTTTCCGGCCATATTCAACTTTGGAGACTCCAACTCTGACACCGGCGGTCTCTCTGCCGCCTTCGGCCAACCCGGTCCTCCTCACGGCGAGTCCTTCTTCCACCACCCAGCCGGACGCTTCTGCGACGGCCGTCTTGTCATAGATTTCATAGCTAAGGAGCTGGGTCTGCCATATTTGAATGCTTTCCTTGATTCGGTTGGCTCAAATTTTACGCATGGAGCCAACTTCGCCACAGCCGGATCCACCATCAGGCCTCAGAACACAACCCTTCATCAGGTTGGTGGGTTCAGTCCTTTCTCTCTGGACGTTCAGTTCAATCAATTCAGTGATTTCCAGCGCAGATCTCAAACTTTTCGCAATAAAGGAGGATTGTATACAACATTGCTACCAAAATCACGATACTTTTCTCGTGCATTATACACTTTCGATATTGGGCAGAACGATTTGACAGCAGGATATTTCCATAACATGTCCACTGATCAAGTCAAAGCATATGTTCCTGATCTTTTAGCACAGTTCAAGACCATTGTGAAGTATGCATATGATCATGGAGGAAGGTCGTTCTGGATACACAACACAGGTCCAGTTGGTTGTTTACCATACATAATGGACCTTCATCCATTGAAAACAACTCAGGTGGATAAAGCTGGATGTGCTATCCCTTACAATGAGGTCGCTCGATACTTCAATCGTCGGTTAAAAGCGGTTGTGCTTCAACTCAGAGAGAAGCTTCCCTTGGCTGCAATCACCTACGTTGATGTCTACTCTGTCAAGTACTCCCTCATCAGCCAAGCAAAGAAGCATGGCTTTATGGAACCACTGATGGCTTGCTGTGGGCATGGCGGGAAGTACAACTTCAACTCACATATTGGATGTGGAGGGAAGATAAAGGTTCGTGGGAAAGAGGTGTTAGTGGGAAAAGCATGCAAGGATCCATCGGTTCGGGTTAATTGGGATGGTGTGCACTACACTCAGGCTGCTAATAAATGGGTATTTGAACAAATTGTGGATGGATCATTTTCTGATCCTCCTTTTCCTTTGAACAGGGCATGTCATAGGCACCACAATTGA 1224 0.4649 MPVRLLYSQTLDAATSNMRLIQARTLCVWLFISVVLNPELLLLSDASSDCDFPAIFNFGDSNSDTGGLSAAFGQPGPPHGESFFHHPAGRFCDGRLVIDFIAKELGLPYLNAFLDSVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFSDFQRRSQTFRNKGGLYTTLLPKSRYFSRALYTFDIGQNDLTAGYFHNMSTDQVKAYVPDLLAQFKTIVKYAYDHGGRSFWIHNTGPVGCLPYIMDLHPLKTTQVDKAGCAIPYNEVARYFNRRLKAVVLQLREKLPLAAITYVDVYSVKYSLISQAKKHGFMEPLMACCGHGGKYNFNSHIGCGGKIKVRGKEVLVGKACKDPSVRVNWDGVHYTQAANKWVFEQIVDGSFSDPPFPLNRACHRHHN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0572 407 CDD SGNH_plant_lipase_like 53 390 IPR035669 -
Lele06g0572 407 Pfam GDSL-like Lipase/Acylhydrolase 55 386 IPR001087 GO:0016788
Lele06g0572 407 SUPERFAMILY SGNH hydrolase 56 387 - -
Lele06g0572 407 Gene3D SGNH hydrolase 43 389 IPR036514 -
Lele06g0572 407 FunFam GDSL esterase/lipase At1g09390 43 391 - -
Lele06g0572 407 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 41 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0572 Lele-ChrLele06 3437081 3441023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0572 53 405 Acyl Lipid Metabolism Gene Families AT4G10950 29.235 4.09e-34 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0572 06 3437081 3441023 Lele07g0772 07 4393934 4396014 hybridization
Lele06g0572 06 3437081 3441023 Lele08g0578 08 3482994 3486516 hybridization