Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0531 ATGGATATAACTGTTTCTCCACAAGCATTGTGGACACCTGGTCGCAAAATTTTATCTGCTAATTCGCTGAAAGATGTGTGGCTTGTTGTGCGAGAAGGATCTCTAAATGATTTAGAGGCAGCCTTGACATTATTAAAGAAGAACGGAATCAACATCAATTCAAGGAACATATTTGGGCTGAGCCCTCTTCATATTGCCACTTGGAGGAACCACATCCCCATTGTCAGGAGGCTTCTTGCAGCTGGTGCAGACCCTGATGCTCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTTTGCATTTTGGACATCTTGCTGTGGCAGGCATCCTTCTTCAGCATGGTGCCTCTATTACAATAGAGGACTATAAATCTCGAGTACCTGTAGATCTCTTATCTGGCCCTGTGTTTCAGGTCTTTAGAAATGAATGTGATTCAGTGGCTACTGAGGTTTTTAGTTGGGGAAGTGGCACAAACTATCAGCTTGGAACTGGAAATGCGCACATTCAAAAGTTACCATGTAAAGTTGATTCACTTGGTGGTTCCTACATAAAGTTGATTTCTGCCGCAAAATTCCACAGTGTGGCTGTTACAACTAATGGAGAAGTGTATACCTGGGGATTTGGAAGGGGGGGCCGTCTAGGTCACCCGGATTTTGACATCCATAGTGGTCAAGCTGCAGTCATCACTCCCCGGCAGGTGACTTCTGGTCTGGGTGCTTGCCGAGTGAAGGCAATTGCTGCTGCAAAGCATCATACTGTCGTTGCTACAGAAGGTGGTGGTGAAGTGTTCACCTGGGGATCCAATAGAGAGGGACAGCTTGGCTACCCTTCTGTTGATACCCAACCCACACCCCGTAGAGTGGCTTCTTTACGGTCCAAAATTGTTGCTGTTGCTGCAGCTAACAAGCATACTGCTGTAGTTTCTGATTTAGGCGAAATTTTTACCTGGGGTTGCAATAGAGAGGGTCAGCTTGGTTATGGCACCTCAAATTCAGCATCTAATTACACCCCGCATGTAGTTGAATACTTGAAGGGAAAGAATTTGACTGGAGTTTCTGCTGCAAAATATCATACAGTTGTATTAGGATCTGATGGAGAGGTATATACTTGGGGTCATCGTCTTGTTACTCCAAAACGTGTAGTCATTACTAGGAACTTGAAGAAAAGTGGAAGCACACTTTTGAAGTTCCACCGCATGAAACGACTTCATGTAGTTTCCATAACTGCTGGAATGGTGCATAGCACAGCTCTTACAGATGATGGTGCATTGTTCTATTGGGTCTCCTCCGATCCCGATCTTAAATGCCAACAGCTATATGCTATGTCTGGAAGAAATATGGCGAGTATATCTGCGGGAAAGTACTGGACTGCAGCTGTTACAACTTCTGGTGATGTTTATATGTGGGATGGGAAGAAAGGTAAGGAAAAGCCACCTGTTGTGACTCGGTTGCATGGTGTAAAGAGGGCCACTTCAGTTGCAGTTGGTGAAACACATTTACTGATTGTAGCTTCCCTCTATCATTGTGGCTATCCTCTTAATGTGACAAAGGCTTCCCGGGAACTCAAGCTTAATCATAGGGATGATATGGAAGAGATTACAGAAGATATTTTATTTGAGAATTTGGAATCCAATAATATGACTCACTGTATACAAAAAGATAATTTTGGGAAGAGGATTGTACCTAGTCTAAAAAGCCTTTGCGAAAAGGTTGCAGCAGAGTGTCTAGTGGAGCATCGAAATGCCATTCAGTTGCTTGAGATTGCTGATTCTCTAGGAGCCAATGATTTGAAGAAATATTGTGAGGAGATTGTCATTCGCAACCTTGATTATATCTTTACAGTTTCATCACATTCTGTGGAAAGTGCTTCGCCAGATATTCTGGCTAACCTTGAGACCTTGTTAGGCCAGAGATCATCTGAACAATGGAGTCACCGCCGACTCCCTACTGTTACTGCTCCTTTTCCTCCCATCATAAACAGTGAAGAAGATCATGGTGACATGGAGTTTCACAGGACTCTTGACAGACCAATGAAATTAAACTTGGAAAAGGATCAAAGACTAGATTCGTTTCTCCAGCCTAAGGATGATCCCAATCAAGAAAACTCCAAAGTAGTTCGGGCTCTAAGGAAGAAGTTGCAGCAGATTGAGGTGCTCGAAGCTAAGCAATCTAAGGGTCATAACCTTGATGAGCAGCAGATCGCAAAGCTTCAGTCTAAGTCAGCTTTGGAGAGGTCACTTGCAGAGCTAGGTGTTCCTATTGAAACTTCACAGCATAAAGACTTGTCTTCTGCTCATTCAGAAGGGAAAGGTAATAAAAAAGGTAAACTATCAAGAAAACAGAGAAAGAACAGCACATCAAGTGTGGTGCAGACTGAAGTGGAATCTATTTATGCTGGAACAGAAGTAATATCAGAACCTGCAAAGGACATGTTGGACATTAAAATCTTGGAGGCTTCTGAGATAAAGGTGGAAGATTCTGCTTGTGAACAAACTACAGCGGACAAAGGTGCAGCAGATTCAGCTCTTGTGGTCCAGAAGAAAGACAATTTAGAGTTGCCAAACAAGTGTCAGTCACTGAAGGTTTCTAAGAAGAAGAGCAAGAAAGGTGGGCTTTCTATGTTTTTGAGTGGTGCCCTTGATGATGCCCCAAAAGAGGTGGCCTCCCCTCCGCCAATGCCGAGAAATGAGGGTCCTGCATGGGGTGGGGCCAAGTTTTTAAAGGGTTCTGCTTCTCTTCGCGAAATTCAGGTTGAGCAGAGCAAAATCAAGGAAAATAAGCCTAGTAAGAGCAAACATCAGGAGCAAGATCTTTCTGATAGTGGCAGTGGGGGGCAAGTATCATTAAGTTCATTTCTTCCTTCCAGCCCAATACCCTTTTCCTCAACTCAAAGTTCCCAGGTATCTGATGGAGAAAGAGGTACCCCTTCTTGGGCTGCTTCCAGAACCCCACCTCATCCATCTCGGCCATCTTTAAGGGACATTCAAATGCAGCAGGGGAAAATGCATGAGAGTCTGTCCCATAGTCCAAAGACCAGGACAACTGGATTTGCTGTTACTACAGGTCAGGGCTCGCCATCTGAAGCTACAGGGATCAACCACTGGTTCAAGCCAGAGGTGGAGATAATATCCTCAATCCGGTCTATTCAGATTGAGGAAAAGGCCATGAAGGATCTCAAGCGCTTCTACAGAAGCGTTAAGGTTGTCAAGAAAAGTCTTGAGGGTTGA 3231 0.4432 MDITVSPQALWTPGRKILSANSLKDVWLVVREGSLNDLEAALTLLKKNGININSRNIFGLSPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVAGILLQHGASITIEDYKSRVPVDLLSGPVFQVFRNECDSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSYIKLISAAKFHSVAVTTNGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGACRVKAIAAAKHHTVVATEGGGEVFTWGSNREGQLGYPSVDTQPTPRRVASLRSKIVAVAAANKHTAVVSDLGEIFTWGCNREGQLGYGTSNSASNYTPHVVEYLKGKNLTGVSAAKYHTVVLGSDGEVYTWGHRLVTPKRVVITRNLKKSGSTLLKFHRMKRLHVVSITAGMVHSTALTDDGALFYWVSSDPDLKCQQLYAMSGRNMASISAGKYWTAAVTTSGDVYMWDGKKGKEKPPVVTRLHGVKRATSVAVGETHLLIVASLYHCGYPLNVTKASRELKLNHRDDMEEITEDILFENLESNNMTHCIQKDNFGKRIVPSLKSLCEKVAAECLVEHRNAIQLLEIADSLGANDLKKYCEEIVIRNLDYIFTVSSHSVESASPDILANLETLLGQRSSEQWSHRRLPTVTAPFPPIINSEEDHGDMEFHRTLDRPMKLNLEKDQRLDSFLQPKDDPNQENSKVVRALRKKLQQIEVLEAKQSKGHNLDEQQIAKLQSKSALERSLAELGVPIETSQHKDLSSAHSEGKGNKKGKLSRKQRKNSTSSVVQTEVESIYAGTEVISEPAKDMLDIKILEASEIKVEDSACEQTTADKGAADSALVVQKKDNLELPNKCQSLKVSKKKSKKGGLSMFLSGALDDAPKEVASPPPMPRNEGPAWGGAKFLKGSASLREIQVEQSKIKENKPSKSKHQEQDLSDSGSGGQVSLSSFLPSSPIPFSSTQSSQVSDGERGTPSWAASRTPPHPSRPSLRDIQMQQGKMHESLSHSPKTRTTGFAVTTGQGSPSEATGINHWFKPEVEIISSIRSIQIEEKAMKDLKRFYRSVKVVKKSLEG 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0531 1076 Pfam Ankyrin repeats (3 copies) 39 123 IPR002110 GO:0005515
Lele08g0531 1076 SUPERFAMILY Ankyrin repeat 36 132 IPR036770 -
Lele08g0531 1076 PANTHER BTK-BINDING PROTEIN-RELATED 2 1065 - -
Lele08g0531 1076 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 313 366 IPR000408 -
Lele08g0531 1076 Pfam Regulator of chromosome condensation (RCC1) repeat 262 309 IPR000408 -
Lele08g0531 1076 Pfam Regulator of chromosome condensation (RCC1) repeat 151 198 IPR000408 -
Lele08g0531 1076 Pfam Regulator of chromosome condensation (RCC1) repeat 201 256 IPR000408 -
Lele08g0531 1076 Pfam Regulator of chromosome condensation (RCC1) repeat 313 363 IPR000408 -
Lele08g0531 1076 Gene3D - 143 389 IPR009091 -
Lele08g0531 1076 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 150 201 IPR000408 -
Lele08g0531 1076 Gene3D - 396 550 IPR009091 -
Lele08g0531 1076 MobiDBLite consensus disorder prediction 919 938 - -
Lele08g0531 1076 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 367 422 IPR000408 -
Lele08g0531 1076 MobiDBLite consensus disorder prediction 939 985 - -
Lele08g0531 1076 ProSiteProfiles Ankyrin repeat profile. 92 124 IPR002110 GO:0005515
Lele08g0531 1076 ProSiteProfiles Ankyrin repeat profile. 58 90 IPR002110 GO:0005515
Lele08g0531 1076 SUPERFAMILY RCC1/BLIP-II 403 505 IPR009091 -
Lele08g0531 1076 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 262 312 IPR000408 -
Lele08g0531 1076 ProSiteProfiles Ankyrin repeat region circular profile. 92 123 - -
Lele08g0531 1076 Gene3D - 20 139 IPR036770 -
Lele08g0531 1076 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 202 260 IPR000408 -
Lele08g0531 1076 MobiDBLite consensus disorder prediction 755 790 - -
Lele08g0531 1076 MobiDBLite consensus disorder prediction 863 1032 - -
Lele08g0531 1076 SMART ANK_2a 92 121 IPR002110 GO:0005515
Lele08g0531 1076 SMART ANK_2a 58 87 IPR002110 GO:0005515
Lele08g0531 1076 ProSiteProfiles Ankyrin repeat region circular profile. 58 89 - -
Lele08g0531 1076 SUPERFAMILY RCC1/BLIP-II 114 428 IPR009091 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 204 220 IPR000408 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 460 481 IPR000408 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 151 167 IPR000408 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 299 315 IPR000408 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 315 329 IPR000408 -
Lele08g0531 1076 PRINTS Chromosome condensation regulator RCC1 signature 262 278 IPR000408 -
Lele08g0531 1076 MobiDBLite consensus disorder prediction 993 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0531 Lele-ChrLele08 3224633 3230577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0531 29 132 Acyl Lipid Metabolism Gene Families AT5G53470 35.577 8.67e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0531 08 3224633 3230577 Lele08g0531 08 3224633 3230577 ECH
Lele06g0527 06 3176246 3182237 Lele08g0531 08 3224633 3230577 hybridization