Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0527 ATGGATATAACTGTTTGTCCACAAGCATCGTGGACACCTGGTCGCAAAATTTTATCTGCTAATTTGCTGAAAGATGTGTGGCTTGTTGTGCGAGAAGGATCTCTAAATGATGTAGAGGCAGCCTTGACATTATTAAAGAAGAACGGAATCAATATCAATTCAAGGAACATTTTTGGGCTGACCCCTCTTCATATTGCCACTTGGAGGAACCACATCCCCATTGTCAGGAGGCTTCTTGCAGCTGGTGCAGACCCTGATGCTCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTTTGCATTTTGGACATCTTGCTGTGGCAGGCATCCTTCTTCAGCATGGTGCCTCTATTACAATAGAGGACTATAAATCTCGAGTACCTGTAGATCTCTTATCTGGCCCTGTGTTTCAGGCCTTTAGAAATGAATGTGATTCAGAGGCTGAGAAATTACAATACAATATTTTGGGCATAGTGGCTACTGAGGTCTTTAGTTGGGGAAGTGGCACAAACTATCAGCTTGGAACTGGAAATGCGCACATTCAAAAGTTACCATGTAAAGTTGATTCACTTGGTGGTACCTACATAAAGTTGATTTCTGCCGCAAAATTCCACAGTGTGGCTGTTACAACTAATGGAGAAGTGTATACCTGGGGATTTGGAAGGGGGGGCCGTCTAGGTCACCCGGATTTTGACATCCATAGTGGTCAAGCTGCAGTCATCACTCCCCGGCAGGTGACTTCTGGTCTGGGTGCTCGCCGGGTGAAGGCAATTGCTGCTGCAAAGCATCATACTGTCGTTGCTACAGAAGGTGGTGAAGTGTTCACCTGGGGATCCAATAGAGAGGGACAGCTTGGCTACCCTTCTGTTGATACCCAACCCACACCCCGTAGAGTGGCTTCTTTAAGGTCCAAAATTGTTGCAGTTGCTGCAGCAAACAAGCATACTGCTGTAGTTTCTGATTTAGGCGAAATTTTTACCTGGGGTTGCAATAGAGAGGGTCAGCTTGGTTATGGCACCTCAAATTCAGCATCTAATTATACCCCGCATGTAGTTGAATACTTGAAGGGAAAGAATTTGACTGGAGTTTCTGCTGCAAAATTTCATACAGTTGTATTAGGATCTGATGGAGAGGTATATACTTGGGGTCATCGTCTTGTTACTCCAAGACGTGTAGTCATTACTAGGAACTTGAAGAAAAGTGGAAGCACTCTTTTAAAGTTCCACCGTATGAAACGACTTCATGTAGTTTCCATAACTGCTGGAATGGTGCATAGCACAGCTCTTACAGATGATGGTGCATTATTCTATTGGGTCTCCTCGGATCCCGATCTTAAATGCCAACAGCTATATGCTATGTCTGGAAGAAATATGGTGGGTATATCTGCGGGAAAGTACTGGACTGCAGCTGTTACAACTACTGGTGATGTTTATATGTGGGATGGGAAGAAAGGTAAGGAAAAGCCACCTGTTGTGACTCGGTTGCATGGTGTAAAGAGGGCCACTTCAGTTTCAGTTGGTGAAACACATTTACTAATTGTAGCTTCCCTCTATCATCCTGGCTATCCTCTTAATGTGACAAAGGCTTCCTGGGAACTCAAGTTTAATCATAGGGATGATATGGAAGAGATTACAGAAGATATTTTATTTGAGAATTTGGAATCCAATAATAGGACTCACTGTATACAAAAAGATAATTTTGGGAAGAGGATTGTACCTAGTCTAAAAAGCCTTTGTGAAAAGGTTGCGGCAGAGTGTCTAGTGGAGCATCGAAATGCCATTCAGTTGCTTGAGATTGCTGATTCTCTAGGGGCCAATGATTTGAAGAAATATTGTGAGGAGATTGTCATTCGCAACCTTGATTATATCTTTACAGTTTCATCACATTCTGTGGAAAGTGCTTCACCAGATATTCTGGCTAACCTTGAGACATTGTTAGGCCAGAGATCATCTGAACAATGGAGTCACCGCCAACTCCCTTCTGTTACTGCTCCTTTTCCTCCCATCATAAACAGTGAAGAAGATGATGGTGAAATGGAGTTTCACAGGACTCTTGACAAACCAATGAAATTAAACTTGGAAAAGGATCAAAGACTAGATTCGTTTCTCCAGCCTAAGGATGATCCCAATCAAGAAAACTCCAAAGTAATTCGGGCTCTAAGGAAGAAGTTGCAGCAGATTGAGGTGCTCGAAGCTAAGCAATCTAAGGGTCATCACCTTGATGAGCAGCAGATCGCAAAGCTTCAGTCTAAGTCAGCTTTGGAGAGGTCACTTGCAGAGCTAGGTGTTCCTATTGAAACTTCACAGCATAAAGACTTGTCTTCTGCGCATTCAGAAGGGAAAGGTAATAAAAATGGTAAACTATCAAGAAAACAGAGAAAGAACAGCACATCAAGTGTGGTGCAGACTGAAGTGGAATCTATTTATGCTGGAACAGAAGTAATATCAGAACCTGCAAAGGACATGTTGGACATTAAAATCTTGGAGGCTTCTGAGATAAAGGTGGAAGATTCTGCTTGTGAACAAACTACAGCGGACAAAGGTGCAGCAGATTCAGCTCTTGTGGTCCAGAAGAAAGACAATTTAGTGTTGCCAAACGAGTGTCAGTCACTGAAGGTTTCTAAGAAGAAGAGCAAGAAAGGTGGGCTTTCTATGTTTTTGAGTGGTGCCCTTGATGATACCTCAAAAGAGGTGGCCTCCCCTCCGCCAATGCCGAGAAATGAGGGTCCTGCATGGGGTGGGGCCAAGTTTTTAAAGTGTTCTGCTTCTCTTCGCGAAATTCAGGTTGAGCAGAGCAAAATCAAGGAAAATAAGCCTAGGAAAAGCAAACACAAGGAGCAAGATCTTTCTGATAGTGGCAGTGGGGGGAAAGTATCATTAAGTTCATTTCTTCCTTCCAGCCCTATACCCTTTTCCTCAACTCAAAGTTCCCAGGTATCTGATGGAGAAAGAGGTACGCCTTCTTGGGCTGCTTCCAGAACCCCACCTCATCCATCTCGGCCATCTTTAAGGGACATTCAAATGCAGCAGGGGAAAATGCATGAGAGTCTGTCCCATAGTCCAAAGACCAGAACAACTGGTTTTGCTGTTGCTACAGGTCAGGGCTCACCATCTGAAGCTACAGGGATGAACCGCTGGTTCAAGCCAGAGGTGGAGACAATATCCTCAATCCGGTCTATTCAGATTGAGGAAAAGGCCATGAAGGATCTCAAGCGCTTCTACAGAAGCGTCAAGGTTGTCAAGAAAAGTCTTGAGGGTTGA 3264 0.44 MDITVCPQASWTPGRKILSANLLKDVWLVVREGSLNDVEAALTLLKKNGININSRNIFGLTPLHIATWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVAGILLQHGASITIEDYKSRVPVDLLSGPVFQAFRNECDSEAEKLQYNILGIVATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGTYIKLISAAKFHSVAVTTNGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGARRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYPSVDTQPTPRRVASLRSKIVAVAAANKHTAVVSDLGEIFTWGCNREGQLGYGTSNSASNYTPHVVEYLKGKNLTGVSAAKFHTVVLGSDGEVYTWGHRLVTPRRVVITRNLKKSGSTLLKFHRMKRLHVVSITAGMVHSTALTDDGALFYWVSSDPDLKCQQLYAMSGRNMVGISAGKYWTAAVTTTGDVYMWDGKKGKEKPPVVTRLHGVKRATSVSVGETHLLIVASLYHPGYPLNVTKASWELKFNHRDDMEEITEDILFENLESNNRTHCIQKDNFGKRIVPSLKSLCEKVAAECLVEHRNAIQLLEIADSLGANDLKKYCEEIVIRNLDYIFTVSSHSVESASPDILANLETLLGQRSSEQWSHRQLPSVTAPFPPIINSEEDDGEMEFHRTLDKPMKLNLEKDQRLDSFLQPKDDPNQENSKVIRALRKKLQQIEVLEAKQSKGHHLDEQQIAKLQSKSALERSLAELGVPIETSQHKDLSSAHSEGKGNKNGKLSRKQRKNSTSSVVQTEVESIYAGTEVISEPAKDMLDIKILEASEIKVEDSACEQTTADKGAADSALVVQKKDNLVLPNECQSLKVSKKKSKKGGLSMFLSGALDDTSKEVASPPPMPRNEGPAWGGAKFLKCSASLREIQVEQSKIKENKPRKSKHKEQDLSDSGSGGKVSLSSFLPSSPIPFSSTQSSQVSDGERGTPSWAASRTPPHPSRPSLRDIQMQQGKMHESLSHSPKTRTTGFAVATGQGSPSEATGMNRWFKPEVETISSIRSIQIEEKAMKDLKRFYRSVKVVKKSLEG 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0527 1087 MobiDBLite consensus disorder prediction 930 1043 - -
Lele06g0527 1087 ProSiteProfiles Ankyrin repeat region circular profile. 58 89 - -
Lele06g0527 1087 SMART ANK_2a 58 87 IPR002110 GO:0005515
Lele06g0527 1087 SMART ANK_2a 92 121 IPR002110 GO:0005515
Lele06g0527 1087 MobiDBLite consensus disorder prediction 767 802 - -
Lele06g0527 1087 MobiDBLite consensus disorder prediction 773 787 - -
Lele06g0527 1087 Gene3D - 23 147 IPR036770 -
Lele06g0527 1087 PANTHER BTK-BINDING PROTEIN-RELATED 27 1076 - -
Lele06g0527 1087 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 378 433 IPR000408 -
Lele06g0527 1087 ProSiteProfiles Ankyrin repeat profile. 92 124 IPR002110 GO:0005515
Lele06g0527 1087 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 162 213 IPR000408 -
Lele06g0527 1087 Pfam Regulator of chromosome condensation (RCC1) repeat 324 374 IPR000408 -
Lele06g0527 1087 Pfam Regulator of chromosome condensation (RCC1) repeat 273 320 IPR000408 -
Lele06g0527 1087 Pfam Regulator of chromosome condensation (RCC1) repeat 213 268 IPR000408 -
Lele06g0527 1087 Pfam Regulator of chromosome condensation (RCC1) repeat 163 210 IPR000408 -
Lele06g0527 1087 ProSiteProfiles Ankyrin repeat profile. 58 90 IPR002110 GO:0005515
Lele06g0527 1087 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 273 323 IPR000408 -
Lele06g0527 1087 SUPERFAMILY RCC1/BLIP-II 162 439 IPR009091 -
Lele06g0527 1087 Gene3D - 155 400 IPR009091 -
Lele06g0527 1087 MobiDBLite consensus disorder prediction 891 916 - -
Lele06g0527 1087 ProSiteProfiles Ankyrin repeat region circular profile. 92 123 - -
Lele06g0527 1087 MobiDBLite consensus disorder prediction 1004 1042 - -
Lele06g0527 1087 MobiDBLite consensus disorder prediction 930 952 - -
Lele06g0527 1087 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 214 272 IPR000408 -
Lele06g0527 1087 SUPERFAMILY Ankyrin repeat 37 132 IPR036770 -
Lele06g0527 1087 Pfam Ankyrin repeats (3 copies) 40 123 IPR002110 GO:0005515
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 326 340 IPR000408 -
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 216 232 IPR000408 -
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 273 289 IPR000408 -
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 163 179 IPR000408 -
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 423 441 IPR000408 -
Lele06g0527 1087 PRINTS Chromosome condensation regulator RCC1 signature 310 326 IPR000408 -
Lele06g0527 1087 SUPERFAMILY RCC1/BLIP-II 415 514 IPR009091 -
Lele06g0527 1087 Gene3D - 405 524 IPR009091 -
Lele06g0527 1087 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 324 377 IPR000408 -
Lele06g0527 1087 MobiDBLite consensus disorder prediction 953 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0527 Lele-ChrLele06 3176246 3182237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0527 31 132 Acyl Lipid Metabolism Gene Families AT5G53470 39.216 5.98e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0527 06 3176246 3182237 Lele06g0527 06 3176246 3182237 ECH
Lele06g0527 06 3176246 3182237 Lele07g0737 07 4152744 4154027 hybridization
Lele06g0527 06 3176246 3182237 Lele08g0531 08 3224633 3230577 hybridization