Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0512 ATGGCTTCTTTTCTATCCTTATCACTTTCCAAATTAAACTTAGTTAAGGCTTCCTCTGCATCTACCTCCGCCCCCACTCTCACTACTCCAGAGGAACTTACTGAGAAATATGGTAGGAAAGGCATTAAGTTCTTGGAATCTGATAACACCCCCATTGCTGAGCTCACTGTTAGAAATGGCAGCTCCTTGAGATTGCAAATACCAGATGCTCATGTCACTTCCTACAAACCAAAAGTCTATTGGAAAGATGATGGCTTTGAGGAGGTCCTATATACACTTCTACCTGGTGGTGGAACAGGCTCTTCCAAACATAAGGGTGGGATTGATTTGGTCTTGAATGAAGTGTTAGAACCTGGTTCTAAAGAATCACTTCCCTCTGCGTTAGAGTGGACCCTCAGTGATGTTGATTCTGATGCCATTGATGCTCTTCAGATTGAATTGAGCTACACTAGTAGAACACTTGACATCACCTACGTTGTAACTCTGTACCCATTGAGCTTGGCCACAGCAGTCATAGTAAAGAACACAGGTCGAAAAGCTGTGACTCTGAGCAATGCCATACTCAGCCATTTTAGATTTAAGAAAAGAGGTGGGACCGCAATCAACGGTCTTCGTAGCTGCACTTACTGCCCACACCCTCCTCCACCTTCTCCTTTTCAAATCCTGACTCCAGCTGAAGCAATGAAATTTGAGTCTCCTGGATGGCTTACCTATGAGTCTGAGGTTGAAGAGAAGCAAGGCAAGTGGTCTCATCAGACTGTGCCTTTTACCATTCTGGAGAACAAGATAAGCAGAGTGTATGCTGCCCCTCCAACAGAGAGATCAAAGGCATTTTATAACACTCCACCTTCCAAGTATGAAACTGTTGATCAGGGACGTGAGCTGAGCTTTAGGGTTATAAGAATGGGTTTTGAGGATATATATGTGTCTAGCCCCGGTTCATTGTCAGAGAAATATGGAAAGGACTACTTTATCTGCACTGGTCCTGCTTCAATTTTGGTGCCCGTCACTGTAAATCCTGGTGAACAATGGAGGGGAGCGCAAGTTATTGAGCATGATAATCTGAGAGAGTTCCCATTGGTGGCTTCAGTCCCATACCAACCTCTCAATGTAGATTACCTGGAAGGAGAATTCAGTGGGCATGGAGTCACTTTTGAAGGTGTTGGTGAAAGCTGTGTTGCCAAAATGGAGCTGCAAAATGGAAGCTCTGCAACTCTGATGCTTCCAAGTGGATTGATCACCTCCTGCAAGTCCCCTATGTGGCATGGCGAAAAGATGGAGTTGCTACACACAGCAGTTTCAGAGGGAGAAGATGGCGAAGCTATCATTCAAGGAGGGGTCTCTCTGAACTTCAATTTTCAAACTGATGATGGCGAAGTTTCATGGTCTTCAACTAATTGGGCGCTTCATGACATTAAACGCAATTCTGAGGAATCAATCCAATTTTGTCTGCCCATATCATGGTTTTTTAGTTATTTACTCAGACAGCTCTTTGAACATGCTACATAA 1509 0.4414 MASFLSLSLSKLNLVKASSASTSAPTLTTPEELTEKYGRKGIKFLESDNTPIAELTVRNGSSLRLQIPDAHVTSYKPKVYWKDDGFEEVLYTLLPGGGTGSSKHKGGIDLVLNEVLEPGSKESLPSALEWTLSDVDSDAIDALQIELSYTSRTLDITYVVTLYPLSLATAVIVKNTGRKAVTLSNAILSHFRFKKRGGTAINGLRSCTYCPHPPPPSPFQILTPAEAMKFESPGWLTYESEVEEKQGKWSHQTVPFTILENKISRVYAAPPTERSKAFYNTPPSKYETVDQGRELSFRVIRMGFEDIYVSSPGSLSEKYGKDYFICTGPASILVPVTVNPGEQWRGAQVIEHDNLREFPLVASVPYQPLNVDYLEGEFSGHGVTFEGVGESCVAKMELQNGSSATLMLPSGLITSCKSPMWHGEKMELLHTAVSEGEDGEAIIQGGVSLNFNFQTDDGEVSWSSTNWALHDIKRNSEESIQFCLPISWFFSYLLRQLFEHAT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0512 502 SUPERFAMILY Galactose mutarotase-like 63 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele08g0512 502 Gene3D - 47 360 IPR014718 GO:0030246
Lele08g0512 502 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 391 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0512 Lele-ChrLele08 3118918 3121528 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1326 13 23280813 23288994 Lele08g0512 08 3118918 3121528 CCT
Lele08g0512 08 3118918 3121528 Lele08g0512 08 3118918 3121528 ECH
Lele05g0680 05 4014082 4015574 Lele08g0512 08 3118918 3121528 hybridization
Lele06g0505 06 3065920 3069302 Lele08g0512 08 3118918 3121528 hybridization