Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0402 ATGGGGCGAAAGAACACAATTCTCTTGCAGCTCAATATGATGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGATTTTAACACATGGTCTTCAGGACAAACATTCAAGTTCTGGGTTGCATAGTGTGGTTGAACTAGGCAGCGAGAGTGACTTCAAGAGCTGTGATATTAGCAATCCAGTGAACTCCATGAGCAGCGGCAACGATGTGGTGAAATTGAACAAGGCAGGCACGAGGTACTTCGCTTGTGGTACCGCGGGCCACTGCGCGCAAGGCATGAAGGTGAAGATTACAACAGTTGCTGGGAATGCACACTCTTCGCCTTCTTCATCCTCCTCATCTTCATCATCATCATTTTCCCCTGCTTCTACTTCTGCAGCTTCAGCTTCACGAGGGCTTACTGTTTCCGTCATACTAATTTGTGTCTCTGTTCTGCTCGTCTTGAGGATCTGA 453 0.4768 MGRKNTILLQLNMMLVEAKVGMNPQILTHGLQDKHSSSGLHSVVELGSESDFKSCDISNPVNSMSSGNDVVKLNKAGTRYFACGTAGHCAQGMKVKITTVAGNAHSSPSSSSSSSSSSFSPASTSAASASRGLTVSVILICVSVLLVLRI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0402 150 CDD Phytocyanin 37 98 - -
Lele08g0402 150 Pfam Plastocyanin-like domain 38 93 IPR003245 GO:0009055
Lele08g0402 150 MobiDBLite consensus disorder prediction 102 121 - -
Lele08g0402 150 PANTHER BLUE COPPER PROTEIN 37 114 IPR039391 GO:0009055
Lele08g0402 150 Gene3D - 33 114 IPR008972 -
Lele08g0402 150 ProSiteProfiles Phytocyanin domain profile. 1 101 IPR003245 GO:0009055
Lele08g0402 150 SUPERFAMILY Cupredoxins 38 99 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0402 Lele-ChrLele08 2473712 2474276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0402 30 100 Miscellaneous Gene Families AT3G27200 67.606 6.84e-30 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0402 08 2473712 2474276 Lele08g0402 08 2473712 2474276 ECH
Lele05g0573 05 3363111 3368194 Lele08g0402 08 2473712 2474276 hybridization
Lele06g0396 06 2423505 2429075 Lele08g0402 08 2473712 2474276 hybridization