Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0396 ATGGGGCGGAAGAACACAATTCTCTTGGCATTGATAGCTGCTTTGTTCGCAAAGGAAGCCTTGGCAGCTCAATATGATGTTGGTGGAAGCCAAGGTTGGGATGAATCCACAGATTTTAACACATGGTCTTCAGGACAAACATTCAAGGTCGGCGATCAACTTGTGTTCAAGTACAGTTCTGGGTTGCATAGTGTGGTTGAACTAGGCAGCGAGAGTGACTTCAAGAGCTGTGATATTAGCAATCCAGTGAACTCCATGAGCAGCGGCAATGATGTGGTGAAATTGAACAAGGCAGGCACGAGGTACTTCGCTTGTGGTACCGCAGGCCACTGCGAGCAAGGCATGAAGGTGAAGATTACAACAGTTGCTGGGAATGCACCCTCTTCGCCTTCTTCATCCTCATCATCATCATTGTCCCCTGCTTCTACTTCTGCAGCTTCATCTTCACGAGGACTTACTGTCTCCGTCATGCTAATTTGTGTCTCTGTTCTGCTCCATGCAAAGTTTATCAAGCCTTCTTTTGATGATTTTATTCATTCATCAAAGAAGTATGCTGATGTGATCATTCCACGAGGAAGTGATAATCATGTCGCCATTGATCTGATTGTACAACATATCCAGAAACTTGGTCAACATGATCTGTGCAAGATATACTCTAATCTGTATGTTATACAGTCAACATTCCAGATCCGAGGAATGCATACATTGATTCGTGATCGAGACATATCAAAGCATGATTTGCGTTTTACTCTGATAGACTTATACGGCTGCATTTCTTTGAAAATGATGGCATGTCAAATTGAGGCATACGAGAATGATGTCGATATATACTTGTTTCAGGGCGCAATTTTTTGGCCAGGCAATCACACGGGTGAAGATCCTGATTCAGTGACTTCTCGTAATTTATTTTGTAATCAGCTAATGCATGCTTTCAATATCTTGCTTAAGAAGTTACAGAAGTATATTCCATATGGAGCATCTGTTGCAGATTTGTATGCTGGAGCTGGGGTCATTGTAACTGACACAAGTGCAGCTCGAGCTCAACAGTCAAAGAAGAGAAAAGGCCTTGGGTTTTGCGTGCTAAGGAAGCTTCAGTCCAGGACTGCAAGGCATTATTGTCTGGTAAGGCATGGTGCTTGGAGAAAGCCCATGGTTTTAAGTTTTTCCCTGGCACCTAAAGGTGGAAAAGGCCATTTTGTTTCATGA 1206 0.432 MGRKNTILLALIAALFAKEALAAQYDVGGSQGWDESTDFNTWSSGQTFKVGDQLVFKYSSGLHSVVELGSESDFKSCDISNPVNSMSSGNDVVKLNKAGTRYFACGTAGHCEQGMKVKITTVAGNAPSSPSSSSSSSLSPASTSAASSSRGLTVSVMLICVSVLLHAKFIKPSFDDFIHSSKKYADVIIPRGSDNHVAIDLIVQHIQKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDRDISKHDLRFTLIDLYGCISLKMMACQIEAYENDVDIYLFQGAIFWPGNHTGEDPDSVTSRNLFCNQLMHAFNILLKKLQKYIPYGASVADLYAGAGVIVTDTSAARAQQSKKRKGLGFCVLRKLQSRTARHYCLVRHGAWRKPMVLSFSLAPKGGKGHFVS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0396 401 CDD Phytocyanin 23 120 - -
Lele06g0396 401 Gene3D - 211 323 IPR029057 -
Lele06g0396 401 FunFam Blue copper 21 127 - -
Lele06g0396 401 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055
Lele06g0396 401 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Lele06g0396 401 SUPERFAMILY Cupredoxins 22 121 IPR008972 -
Lele06g0396 401 Gene3D - 162 210 IPR027417 -
Lele06g0396 401 Gene3D - 21 126 IPR008972 -
Lele06g0396 401 PANTHER BLUE COPPER PROTEIN 21 141 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0396 Lele-ChrLele06 2423505 2429075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0396 7 122 Miscellaneous Gene Families AT3G27200 66.379 3.23e-51 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0396 06 2423505 2429075 Lele06g0396 06 2423505 2429075 ECH
Lele06g0396 06 2423505 2429075 Lele07g0601 07 3428745 3429337 hybridization
Lele06g0396 06 2423505 2429075 Lele08g0402 08 2473712 2474276 hybridization