Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0233 ATGGTGGCCACCGTTATCGACGGCAAAACCGTCGGCCAAGCTATCCGATCTGAAATTTCCGACGAAGTCCGCCATCTCTCCGAAAAATATGGCCAGGTTCCGGGACTGGCAGTAGTGATTGTAGGGAACAGGAAGGATTCACAAAGTTATGTGGGTATGAAGAGAAAGGCTTGTGCTGAAGTTGGAATCAAGTCCTTTGACGTAGATCTTCCTGAGCAAGTATCCGAGGCAGATCTAGTGAAACAAGTCCACGAGTTAAATGCCAATCCTGATGTACATGGTATATTGGTTCAACTTCCATTACCAAAGCATATAAATGAAGAGAAAGTTTTGACTGAAATCAGCCTTGAGAAGGATGTAGATGGCTTTCATCCTTTGAACATTGGCAAGCTTTCCATGAAAGGCAGAGAACCGCTATTTGTCCCTTGCACTCCCAAGGCAAATCCTCTTGCTTTTGAAAAACCTTTTGGATGTCTTGAACTTCTCCACCGAAGTGGTGTGAGTATAAAGGGCAAGAATGCAGTCGTGGTTGGTCGAAGTAATATAGTTGGATTGCCAGTTTCAATGCTTCTTCTTAAAGCAGATGCTACAGTTACCATTGTTCATTCACGCACAAGTGAACCGGAAAGAATCATCCGTGAAGCAGATATTGTAATTGCAGCTGCTGGACAACCAATGATGATCAAGGGCAGCTGGATTAAACCTGGAGCTGCAGTCATTGATGTTGGCACAAATGCCGTTGATGACCCAACTAAGAAGTCAGGTTATAGGCTTGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAGTAGCTGGATGGATTACTCCTGTTCCTGGTGGTGTGGGCCCGATGACAGTCACAATGTTGCTCCAAAATACCTTGGAGGGAGCCAAGCGCAAGCTTGAGCAGAGTAAGCGACTTAACAACTGA 930 0.4495 MVATVIDGKTVGQAIRSEISDEVRHLSEKYGQVPGLAVVIVGNRKDSQSYVGMKRKACAEVGIKSFDVDLPEQVSEADLVKQVHELNANPDVHGILVQLPLPKHINEEKVLTEISLEKDVDGFHPLNIGKLSMKGREPLFVPCTPKANPLAFEKPFGCLELLHRSGVSIKGKNAVVVGRSNIVGLPVSMLLLKADATVTIVHSRTSEPERIIREADIVIAAAGQPMMIKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLQNTLEGAKRKLEQSKRLNN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0233 309 FunFam Bifunctional protein FolD 8 144 - -
Lele08g0233 309 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 300 IPR020631 GO:0004488
Lele08g0233 309 CDD NAD_bind_m-THF_DH_Cyclohyd 117 298 IPR020631 GO:0004488
Lele08g0233 309 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 2 299 - -
Lele08g0233 309 FunFam Bifunctional protein FolD 150 277 - -
Lele08g0233 309 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 IPR020630 GO:0004488
Lele08g0233 309 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 3 122 IPR046346 -
Lele08g0233 309 Gene3D - 6 277 - -
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 274 292 IPR000672 GO:0004488
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 IPR000672 GO:0004488
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 216 245 IPR000672 GO:0004488
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 IPR000672 GO:0004488
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 257 273 IPR000672 GO:0004488
Lele08g0233 309 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 IPR000672 GO:0004488
Lele08g0233 309 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 IPR020867 GO:0003824
Lele08g0233 309 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 278 286 IPR020867 GO:0003824
Lele08g0233 309 Hamap Bifunctional protein FolD [folD]. 3 301 IPR000672 GO:0004488
Lele08g0233 309 Gene3D Leucine Dehydrogenase, chain A, domain 1 8 295 - -
Lele08g0233 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 299 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0233 Lele-ChrLele08 1406139 1410638 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0233 08 1406139 1410638 Lele08g0233 08 1406139 1410638 ECH
Lele05g0412 05 2344863 2347672 Lele08g0233 08 1406139 1410638 hybridization
Lele06g0228 06 1384206 1386946 Lele08g0233 08 1406139 1410638 hybridization