Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0412 ATGGTAGCCACCGTTATCGACGGCAAAGCCGTCGCCCAAGCCATCCGATCTGAAATTTCCGACGGAGTTCGCCTTCTCTCTCAAAAATATGGCCAGGTTCCGGGACTGGCAGTAGTGATTGTAGGGAACAGGAAGGATTCACAAAGCTATGTGGGTATGAAGAGAAAGGCTTGTGCTGAAGTTGGAATCAAGTCCTTTGACGTAGATCTTCCTGAGCAAGTATCCGAGGCGGATCTAGTAAAACAAGTCCACGAGTTAAATGCCAATCCTGATGTACATGGTATATTGGTTCAACTTCCATTACCAAAGCATATAAATGAAGAGAAAGTTTTGACTGAAATTAACCTTGAGAAGGATGTAGATGGCTTTCATCCTCTGAACATTGGCAAGCTTTCCATGAAAGGCAGAGAACCACTATTCGCCCCTTGCACTCCCAAGGGATGCCTTGAACTTCTCCACCGAAGTGGTGTGAGTATAAAGGGCAAGAAGGCCGTCGTGGTTGGTCGAAGTAACATAGTTGGATTGCCAGTTTCAATGCTTCTTCTTAAAGCAGATGCTACAGTTACCATTGTTCATTCACACACAAGTGATCCGGAAAGAATCATCCGCGAAGCAGATATTGTAATTGCAGCTGCTGGACAACCAATGATGATCAAGGGCAGCTGGATCAAACCTGGAGCTGCAGTCATAGATGTTGGCACAAATCCTGTTAACGACCCAACTAAGAAGTCAGGTTATAGGCTTGTTGGAGATGTAGACTTTGAGGAAGCATCTAAAGTAGCTGGATGGATTACTCCTGTTCCTGGTGGTGTAGGTCCAATGACAGTCACAATGTTGCTCCAAAATACCTTGGAGGGAGCCAAACGCAAGCTTGAGCAGAGTAATTGA 888 0.455 MVATVIDGKAVAQAIRSEISDGVRLLSQKYGQVPGLAVVIVGNRKDSQSYVGMKRKACAEVGIKSFDVDLPEQVSEADLVKQVHELNANPDVHGILVQLPLPKHINEEKVLTEINLEKDVDGFHPLNIGKLSMKGREPLFAPCTPKGCLELLHRSGVSIKGKKAVVVGRSNIVGLPVSMLLLKADATVTIVHSHTSDPERIIREADIVIAAAGQPMMIKGSWIKPGAAVIDVGTNPVNDPTKKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLQNTLEGAKRKLEQSN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0412 295 Gene3D - 6 267 - -
Lele05g0412 295 CDD NAD_bind_m-THF_DH_Cyclohyd 117 288 IPR020631 GO:0004488
Lele05g0412 295 Gene3D Leucine Dehydrogenase, chain A, domain 1 8 285 - -
Lele05g0412 295 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 3 122 IPR046346 -
Lele05g0412 295 FunFam Bifunctional protein FolD 8 148 - -
Lele05g0412 295 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 290 IPR020631 GO:0004488
Lele05g0412 295 Hamap Bifunctional protein FolD [folD]. 3 291 IPR000672 GO:0004488
Lele05g0412 295 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 289 IPR036291 -
Lele05g0412 295 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 IPR020867 GO:0003824
Lele05g0412 295 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 2 289 - -
Lele05g0412 295 FunFam Bifunctional protein FolD 140 267 - -
Lele05g0412 295 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 IPR020867 GO:0003824
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 IPR000672 GO:0004488
Lele05g0412 295 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 IPR000672 GO:0004488
Lele05g0412 295 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 IPR020630 GO:0004488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0412 Lele-ChrLele05 2344863 2347672 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0412 05 2344863 2347672 Lele05g0412 05 2344863 2347672 ECH
Lele05g0412 05 2344863 2347672 Lele07g0430 07 2426383 2431798 hybridization
Lele05g0412 05 2344863 2347672 Lele08g0233 08 1406139 1410638 hybridization