Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0163 ATGGCAACAATAAGTGGTGTGAGCCTTTCAAGTCCCAGACTTGTGCCCAGGGCATCTGACTCGTCGCAGAAGTCGCACACCGTCAAGTTCCCACTGCTACCCATCCAAAGGTTTCCGGCCAATTTTGGTTCGGGCCGAATTCTTACTTCTGTTCGACCCGTGCGAGCTGCTCCAGATAGAATAACCGACAAGGTTGAAGAAAGCATAAAGAGCGCGGAGGAGGCATGCTCGGGTGACCCAGCCGGCAGTGAATGTGCGGCGGCATGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCCAGCCACGCGAGGGACAGGAAGAAAGAATCCGACCCACTTGAGAACTATTGCAAGGACAACCCGGAGACCGATGAGTGCCGCACTTACGATAATTGA 393 0.5598 MATISGVSLSSPRLVPRASDSSQKSHTVKFPLLPIQRFPANFGSGRILTSVRPVRAAPDRITDKVEESIKSAEEACSGDPAGSECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPETDECRTYDN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0163 130 SMART CP12_2 61 130 IPR003823 -
Lele08g0163 130 MobiDBLite consensus disorder prediction 99 130 - -
Lele08g0163 130 MobiDBLite consensus disorder prediction 1 26 - -
Lele08g0163 130 Pfam CP12 domain 61 129 - -
Lele08g0163 130 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 130 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0163 Lele-ChrLele08 1004157 1004549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0163 08 1004157 1004549 Lele08g0163 08 1004157 1004549 ECH
Lele05g0341 05 1939560 1941812 Lele08g0163 08 1004157 1004549 hybridization
Lele06g0160 06 971520 971912 Lele08g0163 08 1004157 1004549 hybridization