Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0096 ATGGGTGCGACTCACACTGAGCTTGGTGAACAATTGGAAAGATTTTGGTGGGAAGAATCAGTATGTGAAATGGAAAGAGAACGTGGCCAGAGCGTGAGCAACGACGATGCCTTCTTTAGCCACCCTGTCGTTAAGCAATTTTACAAGAATCGTATTAAGGCTGTGTTGACTCGAAGGAACACTATAACTGGAGTAGCATATAAAGACGATCCAGCTGTTTTCGTGTGGGAACTAATGAATGAACCTAGTTCTGAATACGATCGCTCTAGGAAAAGAATTCAGATCCGATCCTTTTCTTTCCCACGCTCACACGTCCTACGCAGTGTGCCAGCTTCTAGCTAA 342 0.4474 MGATHTELGEQLERFWWEESVCEMERERGQSVSNDDAFFSHPVVKQFYKNRIKAVLTRRNTITGVAYKDDPAVFVWELMNEPSSEYDRSRKRIQIRSFSFPRSHVLRSVPASS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0096 113 SUPERFAMILY (Trans)glycosidases 31 89 IPR017853 -
Lele08g0096 113 PANTHER - 19 94 IPR045053 GO:0004553
Lele08g0096 113 Gene3D Glycosidases 6 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0096 Lele-ChrLele08 578860 579428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0096 26 93 Glycoside Hydrolase AT3G10900 52.941 2.91e-21 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0276 05 1563352 1565030 Lele08g0096 08 578860 579428 hybridization