Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0276 ATGGCATCTGACCCATCCACGAGGTCCAAGGTCACTTCCACTTTCCAACAAGCTTCACTCCATGGCTTGAACGTCGCCAGAACTTGGGCCTTCAGCGATGCAGGTTACAGGTCTCTCCAGGTTTCTCCTGGTTCCTACGACGAGAGCGTCTTCAGGGGCTTGGATTTTGTGATATCAGAAGCTGGGAAATATGGGGTGCGACTCATACTGAGCTTGGTAAACAATTGGAAAGATTATGGTGGGAAAAATCAGTATGTGAAATGGGCAAGGGAACGTGGCCAGAGCGTGAGCAACGACGATGCCTTCTTTACCCACCCTGTCGTTAAGCAGTTTTACAAGAATCATATTAAGGCTGTGTTGACTCGAAGGAACACTATAACTGGGGTGGCATATAAAGACGATCCAGCTGTGTTCGCGTGGGAACTAATGAATGAACCTCGTTCTGAATACGATCGCTCTGGAAAAATAATTCAGGACTGGGTGAGTGAGATAGGTGCGTACGTGAAGTCTATCGATCGCAATCATTTGCTGGAAATAGGACTTGAAGGCTTTTATGGGGAATCAATGCCAAACAAGAAGCTCTTCAATCCTGGATACCAATTAGTTGGAACCGATTTCATTTCCAACAATCGAGTTCCTCACGTCGATTTTGCTACTATCCATCTCTACCCAGAACAATGGATACCGGGGTCAAACGAATCGGCCCAATCTGATTTTGTCAACAACTGGGTCCAGGCCCATATTCAAGACAGTAATGATATTCTGGGGAAGCCCATTCTTTTGGGTGAATTCGGGATGTCGGTAAAGTCTGAGGGATATAGCGTGGAGAAGAGGGACAAATACTTTCAGAAGCTTTACGACGCCGTATACGGCAGCGCAAGGGGTGGAGGAGCGTGTGGAGGTGGGCTTTTCTGGCAGGCCATGGCCCAAGGAATGGATGGCCTTCACGACGGGTACGAAATTATGCTTCAGGATAGCTCTTCAACCGTCAACATCATCCGCCAACAATCTCACCGCATGTCAAATCTCCAATAG 1035 0.4773 MASDPSTRSKVTSTFQQASLHGLNVARTWAFSDAGYRSLQVSPGSYDESVFRGLDFVISEAGKYGVRLILSLVNNWKDYGGKNQYVKWARERGQSVSNDDAFFTHPVVKQFYKNHIKAVLTRRNTITGVAYKDDPAVFAWELMNEPRSEYDRSGKIIQDWVSEIGAYVKSIDRNHLLEIGLEGFYGESMPNKKLFNPGYQLVGTDFISNNRVPHVDFATIHLYPEQWIPGSNESAQSDFVNNWVQAHIQDSNDILGKPILLGEFGMSVKSEGYSVEKRDKYFQKLYDAVYGSARGGGACGGGLFWQAMAQGMDGLHDGYEIMLQDSSSTVNIIRQQSHRMSNLQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0276 344 FunFam Mannan endo-1,4-beta-mannosidase 6 1 344 - -
Lele05g0276 344 PANTHER - 1 343 IPR045053 GO:0004553
Lele05g0276 344 Pfam Cellulase (glycosyl hydrolase family 5) 11 282 IPR001547 GO:0004553|GO:0071704
Lele05g0276 344 Gene3D Glycosidases 1 344 - -
Lele05g0276 344 SUPERFAMILY (Trans)glycosidases 4 333 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0276 Lele-ChrLele05 1563352 1565030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0276 1 341 Glycoside Hydrolase AT5G66460 58.944 1.47e-150 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0276 05 1563352 1565030 Lele07g0293 07 1618067 1619744 hybridization
Lele05g0276 05 1563352 1565030 Lele08g0096 08 578860 579428 hybridization