Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1822 ATGAACTGTCGTGGTCGTCTTTTAGTTCATTATAGGGCAACTCTTAGCAAAGGGTTTAACAGAGGATTGGGGTTGGGAACGGCAGAGTTATCAGCATTTGCTGGACCGTGGGAAGAATTTATAATTATTCTCAGCATCTTCACTGCAGATCCAGCTCCAAGTTTCAGCAAACAAGTCATCAGGATCTTGGGAGACAAGATGGCTACAATAGCTAAACCTCTGTATCCCATAGCTGTTTTGATTGATGAGCTAAAGAACGATGACATCCAGCTTAGGCTAAACTCGATCCGCAAACTTTCCACAATTGCACGTGTACTTGGGGAGGAAAGGACCAGGAAGGAATTGATTCCCTTTCTCAGCGAGAACAATGACGATGATGATGAGGTGCTTGTAGCAATGGCAGAGGAGTTGGGGGCTTTTGTCCCTTACGTTGGTGGTTTAGAACATGCCCATGTGCTACTACCTCCATTAGAAGCCCTCTGCTCGGTTGAGGAAACCTGCGTGAGGGACAAAGCAGTAGAGTCACTATGTAGAATTGGAGCTCGAATGAGAGAAAAAGACTTGGTCGACTACTTTATTCCTCTGGTTAAGAGACTGGCTGCTGGTGAGTGGTTCACAGCACGAGTTTCCTCATGTGGTTTGTTTCATATGGCTTACCCTAGTGCACCAGAGGCCTTAAAAGCTGAGCTGAGAACTCTGTTTGGTCAGCTATGTCAAGATGATATGCCAATGGTTAGAAGATCTGCTGTAACAAACCTGGGAAAATTTGCTGCCACTGTTGAAGTTACTCATTTGAAAACCAACATCATGCCCATATTTGAGGATCTCACGCAAGATGAACAAGATTCTGTTCGGTTACTTGCTGTAGAAGGCTGTGCAGCTCTTGGGAAATTGTTGGATCCTCAAGATTCTATGACACTTATTCTTCCTATCATGGTTAATTTCTCCCAGGATAAGTCATGGCGTGTTCGTTACATGGTCGCTAATCAACTATATGAGCTCTGTGAAGCTGTTGGTCCTGAGCCTACCAAGTCAGACTTGCTTCCTGCATATGTTCGGCTACTGCGTGATCATGAGGCTGAAGTACGCATTGCTGCTGCTGGAAAAGTTACAAAGTTTTCTCGCATATTAAATCCAGAACTAGCTATCCAGCATATTCTACCATATGTGAAAGATTTATCATCTGATTCATCTCAACATGTTCGCTCTGCACTATCTTCGGTTGTAATGGGAATGGCGCCAGTTTTAGGGAAGGATGCCACAATTGAGCAGCTTCTGCCTATTTTCCTTTCACTTTTGAAAGATGAGTTTCCTGATGTCAGGCTGAACATCATCAGCAAACTTGACCAAGTGAATCAGGTAATTGGCATTGACCTATTATCTCAGTCTCTATTACCAGCTATTGTTGAGCTTGCTGAGGATCGCCACTGGAGAGTTCGACTCGCAATCATAGAATATATACCCTTATTGGCAAGTCAGTTGGGTGTAGAATTTTTTGACGACAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTCTATTCAATTCGTGATGCTGCTGCTAATAATGTAAAACGCTTAGCAGAAGAATTCGAACCTGATTGGGCAATGGAGCATATTATTCCTCAGGTTTTGGACATGATAAACGATTCAAACTATCTGTACCGAATGACCGTTCTTCATGCAATCGCCCTTTTAGCTCCTGTTCTGGGTTCAGAGATTACTTCTTCAAAACTGCTCCCTCTAGTCATAAACGCATCAAAAGATAGGGTACCCAACATCAAATTCAATGTAGCTAAAGTTCTTCAGTCTATCATTCCGGTTGTAGATCAGTCTGTGGTTGAGAACACTATCCGTCCCTGTTTGGCTGAACTCACTGAGGATCCTGATGTTGATGTTCGGTATTTTGCTACCCAAGCACTACAATCTAACAAGTCCAGCTAG 1950 0.4349 MNCRGRLLVHYRATLSKGFNRGLGLGTAELSAFAGPWEEFIIILSIFTADPAPSFSKQVIRILGDKMATIAKPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARVLGEERTRKELIPFLSENNDDDDEVLVAMAEELGAFVPYVGGLEHAHVLLPPLEALCSVEETCVRDKAVESLCRIGARMREKDLVDYFIPLVKRLAAGEWFTARVSSCGLFHMAYPSAPEALKAELRTLFGQLCQDDMPMVRRSAVTNLGKFAATVEVTHLKTNIMPIFEDLTQDEQDSVRLLAVEGCAALGKLLDPQDSMTLILPIMVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKSDLLPAYVRLLRDHEAEVRIAAAGKVTKFSRILNPELAIQHILPYVKDLSSDSSQHVRSALSSVVMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVEFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFEPDWAMEHIIPQVLDMINDSNYLYRMTVLHAIALLAPVLGSEITSSKLLPLVINASKDRVPNIKFNVAKVLQSIIPVVDQSVVENTIRPCLAELTEDPDVDVRYFATQALQSNKSS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 464 502 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 425 463 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 386 424 IPR021133 -
Lele07g1822 649 Pfam HEAT repeats 427 525 - -
Lele07g1822 649 Pfam HEAT repeats 272 367 - -
Lele07g1822 649 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 71 646 - -
Lele07g1822 649 SUPERFAMILY ARM repeat 75 645 IPR016024 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 542 580 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 581 619 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 269 307 IPR021133 -
Lele07g1822 649 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 68 647 - -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 308 346 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 230 268 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 347 385 IPR021133 -
Lele07g1822 649 Gene3D - 69 645 IPR011989 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 620 649 IPR021133 -
Lele07g1822 649 ProSiteProfiles HEAT repeat profile. 76 114 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1822 Lele-ChrLele07 11576920 11589909 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1822 07 11576920 11589909 Lele07g1822 07 11576920 11589909 ECH
Lele06g1616 06 10804369 10812059 Lele07g1822 07 11576920 11589909 hybridization