Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1601 ATGACAGCTGGTCCAATGAGTGCATATGAACAAGTAGTGCTTGATAGTGAGGATGAAGAAATGCACGGCAGTAAAGTTGTGAATGTTTCCAAAGGGTTATGGGATAAAAAAGCTTTTCGAACAGCTAAAAATCCTAGAATGAAGTTCCAGAAGAGGCATCTTGGGCCACCTTCACCTAGTGAGCAAGCGGAGAAGGGAGCAACAAACACAACTGCCCCTTCTTTTGGGAAATCTTTTACCGGGGACAAAGAAACATCAACTGATGCTGAGAGCTCTGATAACAAAAATCATCTAAATCTGTCTACAAAGTTGACTCAAATACCCTCTCCAGAGATTGGGGATTTAACCCAAGCCGATGCATTGGGATATGTGGATCACTACTTGTCAGTCAACAAAGTAGAAACATCTCCAGGAATTTGCCATAGAAAGGCCAGTAGAGAGAAATCACCACCTCTGATAATTGCAAGAGGGGCACGAAATTTGTCCAAGAAAATTCAAGCTCAGACCCATCATGAAGAAAAAAGACCTTTCGAATGGGTTGACGCGGGTCAGAAGGGCGGAGGAGCTGGTATTTTTCATAAAAGGATTACAGCATCTTCTAATTTTGGAGTCTGTGGACAGACATACTCAAGAAGAAAACAGAAATGCGGTCTTCCTGAGAACCAAGAAACCTGTAGTACAGGTAACGGATGCGAAGAGAAGTTAGATCAAGGACCAGGAGAAGTTTCTGAGAATAATAACTCTATCAAGGAGCTGGATGTTCAGTCAGATGCTGCAGGAAAGAATATTGACGCTTATTCTGGCGTGGAACATACGGAGCACACCTATGATATTGGTTTAGACACTCAGGTAGCTGCTGAAGCTATGGAGGCCTTAGCTTATTTGCCCCCTCCTGATAGCAGATGCACAAGGATCAAAGTTCAATCAAGCAAACAGAGAAAGAGGAATAATAATTTTGAAGATGGAGGTATTGTGAGATCCAAAAGGAAAAAAAGGACTGGTTTAACAGCCGATCCATTCAAGCTGGTTCGTGAGGCAGAATATCTTAAGAAGCCTTCGGGTTTATTTGATCAAGTTCAAGTTTGTCCACGGCTGTCCACTAGCAGCAGTTTTTCAAGTCTTAAATCATGGCATTATCCGAAAGGACCAAGAGGGAAAAGAAAATGTCCTGATGTAAAAAGGCATCTAGATGCACCCAGCAATTGGGGTGCTCAGCCTATCATTGTCAATGGAAATGAAAGTAGTATCTTCTCTATCGCAAATTACAGAATTCAGAGAGATGAAGAAGGCCGAGATATTGATAACCCGCTTTATAATGCTAAATGTATCAGCGCTGGCACCATCAGTGAAGGCAGAGAGATTTCGAATGCCGATGCTACTTGCTATAAGCATCGCAAAAAGCCAAGTAACAAAAACCTGCCAAAATCCTACCTTTTAAAGGAGCTTATTAGATTAGGCGTTTCTGAGTACGCGCCAGAGCTGATAGGGAAAAATCTGAGACCACGAAAAGATATGTCACATGTTCGAGTTCTGTTAAGCCGGCATTTGGATGAGAGTATCATTAAGCAGCAAAAGAAGATCTTGGCACGGATGAACATATCTATTGCATCAAGCCCCATGGAGGCTACGCATTTTGTAGCAGACAAATTCACTCGTACAAAAAATATGTTGGAAACCATGGCTCTCGGTAAATTGGTGGTGACGCACTTATGGCTTGAGAGTTGTGGACAGGCCAACTGTTTAGTTGACGAGAAAAATTATATTCTAAGAGATGTGAAAAAGGAAAAGGAGATGGGCTTCACCATGCCTGTTTCTCTTTCTCGAGCAAAACAGCAACCACTTCTAAAGGGTAAAATTGTCTTCATCACCCCTCACATTAAACCTGATAAAATGGTGGTCACAAGCTTGGTCACAGCTGCTCACGGTCAGTTGGTGGATGAAAACCAGATTCATGCAGGCAAGAACCATGAGATGTTAGATAATCTGTTGATTATTTCTTGTGAGGAAGACCGTGAAGTATGCCGCCCGTTCTTTCAGAGAGGACTTGCTGCTTACGATTCGGAGCTGCTTCTGAGTGGAATAGTGACCCAGAAACTGGAACTCGAGAGGCATCAACTCCTCGCAAATCAGGTTGCAAGGAAATGCCTTGACACATCAAACCGTCGTTTTGGAAAGGTCTACAGAAGGCTTCGCAACCCATACGTGGATCACATTCACAGCTAA 2223 0.4291 MTAGPMSAYEQVVLDSEDEEMHGSKVVNVSKGLWDKKAFRTAKNPRMKFQKRHLGPPSPSEQAEKGATNTTAPSFGKSFTGDKETSTDAESSDNKNHLNLSTKLTQIPSPEIGDLTQADALGYVDHYLSVNKVETSPGICHRKASREKSPPLIIARGARNLSKKIQAQTHHEEKRPFEWVDAGQKGGGAGIFHKRITASSNFGVCGQTYSRRKQKCGLPENQETCSTGNGCEEKLDQGPGEVSENNNSIKELDVQSDAAGKNIDAYSGVEHTEHTYDIGLDTQVAAEAMEALAYLPPPDSRCTRIKVQSSKQRKRNNNFEDGGIVRSKRKKRTGLTADPFKLVREAEYLKKPSGLFDQVQVCPRLSTSSSFSSLKSWHYPKGPRGKRKCPDVKRHLDAPSNWGAQPIIVNGNESSIFSIANYRIQRDEEGRDIDNPLYNAKCISAGTISEGREISNADATCYKHRKKPSNKNLPKSYLLKELIRLGVSEYAPELIGKNLRPRKDMSHVRVLLSRHLDESIIKQQKKILARMNISIASSPMEATHFVADKFTRTKNMLETMALGKLVVTHLWLESCGQANCLVDEKNYILRDVKKEKEMGFTMPVSLSRAKQQPLLKGKIVFITPHIKPDKMVVTSLVTAAHGQLVDENQIHAGKNHEMLDNLLIISCEEDREVCRPFFQRGLAAYDSELLLSGIVTQKLELERHQLLANQVARKCLDTSNRRFGKVYRRLRNPYVDHIHS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1601 740 CDD BRCT_PAXIP1_rpt6_like 614 700 - -
Lele07g1601 740 MobiDBLite consensus disorder prediction 62 82 - -
Lele07g1601 740 Gene3D BRCT domain 613 713 IPR036420 -
Lele07g1601 740 MobiDBLite consensus disorder prediction 306 327 - -
Lele07g1601 740 Gene3D BRCT domain 497 612 IPR036420 -
Lele07g1601 740 MobiDBLite consensus disorder prediction 1 25 - -
Lele07g1601 740 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 502 589 IPR001357 -
Lele07g1601 740 CDD BRCT_MDC1_rpt1 519 582 - -
Lele07g1601 740 MobiDBLite consensus disorder prediction 219 245 - -
Lele07g1601 740 ProSiteProfiles BRCT domain profile. 541 589 IPR001357 -
Lele07g1601 740 MobiDBLite consensus disorder prediction 40 102 - -
Lele07g1601 740 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 63 303 - -
Lele07g1601 740 SUPERFAMILY BRCT domain 498 606 IPR036420 -
Lele07g1601 740 MobiDBLite consensus disorder prediction 313 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1601 Lele-ChrLele07 9909122 9912396 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1545 05 9904239 9907517 Lele07g1601 07 9909122 9912396 hybridization
Lele06g1391 06 8953783 8957616 Lele07g1601 07 9909122 9912396 hybridization