Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1391 ATGGCTGGAAATCCTGCTTCCGACAAGTTGGGACCTTCAGGACCTGCAAATGGCAAGAAGTTGAGTTGGGCTGCTTCCCCTTCCACTGCTTTCAATCACTTTGCTACTAGCGGAGTTTCTGTCGCAGTAGCAACTGCAATTACTCATCCTTTAGATGTACTGAAAGTCAGGCTGCAAATGCAACTAGTTGGCCAGAGAGGTCCTTTGTGGGGGATGGTAGGGCAACTATTTTTTCGAGTATTGAAAATCGAAGGACCCAGGTCTTTGTATCTGGGTTTGACACCTTCATTAACAAGGTCAGTTGTTTATGGAGGCCTCCGCTTGGGCTTGTATGAACCCTCTAAGCATGCCTGTGATCTTGCTTTTGGCTCCACCAATGTTTTAGTTAAAATTGCTTCTGGAGCATTTTCTGGAGCTTTTGCAACCGCCCTGACCAATCCAATGGAAGTTCTAAAGGTGCGTTTGCAAATGAATCCAGACAAGAGGAAGGGAGGACCTATTCTAGAGCTTCGGAGGACTATATCTGAAGAGGGAATGAGTGGCCTTTGGAAGGGAGTGGGCCCTGCTATGATCAGAGCAGCCTCATTGACTGCATCACAGCTGGCTACCTACGACGAAACCAAGCAAATCTTAATCAATCGGACACCTCTTGAAGAAGGATCTTATCTGCACCTGATCTCGAGTACAGTGGCAGGCGTAGTGAGCACCCTAATAACTGCTCCTATGGATATGATTAAAACCCGTCTTATGTTGCAACGAGTATCCAAAACTGCTGGAGGCTATAAAAACGGATTTCATTGTGCATACCAGGTCCTGCTTACAGAAGGCCCAAGAGGACTTTATAAAGGGGGATTTGCAATATTCGCAAGACTAGGGCCACAAACCACAATTACCTTAATGTTATGCGAGGAGCTACGGAAGCTTGCTGGATTGAAGGCAATCTAG 945 0.4646 MAGNPASDKLGPSGPANGKKLSWAASPSTAFNHFATSGVSVAVATAITHPLDVLKVRLQMQLVGQRGPLWGMVGQLFFRVLKIEGPRSLYLGLTPSLTRSVVYGGLRLGLYEPSKHACDLAFGSTNVLVKIASGAFSGAFATALTNPMEVLKVRLQMNPDKRKGGPILELRRTISEEGMSGLWKGVGPAMIRAASLTASQLATYDETKQILINRTPLEEGSYLHLISSTVAGVVSTLITAPMDMIKTRLMLQRVSKTAGGYKNGFHCAYQVLLTEGPRGLYKGGFAIFARLGPQTTITLMLCEELRKLAGLKAI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1391 314 Pfam Mitochondrial carrier protein 125 213 IPR018108 -
Lele06g1391 314 Pfam Mitochondrial carrier protein 222 308 IPR018108 -
Lele06g1391 314 Pfam Mitochondrial carrier protein 28 116 IPR018108 -
Lele06g1391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 117 IPR018108 -
Lele06g1391 314 Gene3D Mitochondrial carrier domain 30 311 IPR023395 -
Lele06g1391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 308 IPR018108 -
Lele06g1391 314 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 30 308 - -
Lele06g1391 314 SUPERFAMILY Mitochondrial carrier 30 304 IPR023395 -
Lele06g1391 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 210 IPR018108 -
Lele06g1391 314 PRINTS Mitochondrial carrier protein signature 46 60 IPR002067 GO:0055085
Lele06g1391 314 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Lele06g1391 314 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Lele06g1391 314 PRINTS Mitochondrial carrier protein signature 33 46 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1391 Lele-ChrLele06 8953783 8957616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1391 34 307 Miscellaneous Gene Families AT3G54110 33.333 2.12e-44 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1391 06 8953783 8957616 Lele07g1601 07 9909122 9912396 hybridization
Lele06g1391 06 8953783 8957616 Lele08g1391 08 8910638 8912236 hybridization