Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1159 ATGGGTAGGCGCGCTGCTCTTGTCCTACTTCCAAAGTTGCGTGGATCACTAAGGAAAGAGCTCTGCAATTCCGTACGTGTTCCGCTTTCCCTTTGCTTCTGCTCCGAACCTGTTTCAGAGACACTTGCTGAAACCCACCATACTCAAATTAATCAGCTTTCCGTAGAATTTAACAAGCAATCCTATTCACAAGAAGAGGAACGGCTTGAACAAGTTCGCAAGTTTCGAAATTTACTTGAAGAGGGTCGCGGACATGATGTCCAAAGGTTCATCAAATCCCTGGTTCTCTCTAAAAACCCATTTTCTTCTCCCTTTGACCTACACGCCTACTTCTCCCTTTCAGCACTCTCCTTGAAACCTGTCTTCTCAAATTTGCTTTTCCGGGCTTGCTCCGAGTCCGAGATGGTCAATGAAGCTATGGAGTTGTACTATTTGATGAGGAAGGATGGTATGCTTCCTTCGACAGGTTCTGTGAATCGGTTGCTCGAAACTTTGATTATTTTGAAACAGTATAAGAAAATTCTTGATCTATTCCCGGATTTTGTGGAGTCTGGCATTCAACCCAACACTTTCTCATACAGCAAAGCTGTTCAGGCGGCAGTGATGCTGAAGGACTTACAAAGGGCTCTCGAATTGATCAAGGACATGGAAGAGGGAGGAGTGAGCCCATCTTCGTTTATTTATAACCTGGTAATAGGTGGGTTGTGTAAAGAGCGGAGAATCACGGATGCTCACAACCTGTTTGATGAAATGATTCAAAGGAAGCTAGTTCCGAATTTGGTTACTTATAATACGCTGATTGATGGATACTGCAAGCTGGGAGAAATAGAGAGAGCTTTGGCTTTGAGGGAGAGGATGAGGGTGGAAAATGTGAAGCCTAATCTTGTCACTCAAAATTCTTTGTTGAGGGGTTTTTATGATTCACAGAGGATGGCAGAAGCGAGGACGTTGTTGCAAGAGATGGAGGCTAACAAGTTTTTGCCGGTTGGATTCACTGTTATTGTATTTGATGATGTCTCGAGTGGAAATATTAATATTTCGTTGGACAAAGAGGGGACGATCAACGAGTATACCTGTAGTATTTTGTTGGATGGATTATGCAGAGCGGGTATGGTTGAAAAGGCCAAGGAGGTTTTGGCCAAACTAACAGAGAGTGGACTTATACCAAGTAAGATAGTATACAATGTATTAGTGAATGCATATTGCCGAGAGGGTGATATAGAGAAAGCCATACTGACAATTGAACAAATGGAAGAACGTGGGTTGGAGGCTAACTATGTGACTTTCAATACCCTCATTAACAAGTTCTTCAAAATGAAGGAGGTGGACCAGGCAGAGAGATGGTTGAAAAAGATGGCAGAGAAGGGTGTTTCCCCCAGTTTGGAAACTTATAACATTCTCATTAATGGTTACGGCTGCATTAGTCAATTTGAGAAATGTTTTCAGATTCTCGAGGAAATGGAAAGAGCAGGGATAGAGCCCAGTGTCTCAAGCTATGGTCTTCTGGTGAATTGCTTGTGCAAAGGAGGCAAGCTTCTTGAAGCTGAACTGATCCTTGTGGATATGGCAAACCGAGGGGTTTCTCCAAACGCAGAAATATATAATATGCTCATTGAAGGTAGCTGCTCGATGGGCAAAATCACAGATGCCTTGAGATTTTTTGAGGAAATGTTTAAAAATGGACCAGGTCCAACTCTTGTAACATATAACACGCTCATATATGGGCTAGGAAAAGATGGGAGGATAACAGAAGCTGAGAAATTTTTCCAGCAAATGGGTAGCAATGGATACAATCCAGATGTAATCTCATACAACTCTTTGATCTCAGGGTATGCCAGGTCAGGAAACACCCAGAAATGCCTTGAATTGTATGATAATATGAAGAAAGTAGGCATTAAACCTACAGTTAGGACGTTTCATCCTCTGATCAATGCAAGCATCAAGGAAGGGGTTGTGACAGCTGAGAGGCTATTTCAGGAAATGTTAGAAATGGGTGTGGTTCCAAATCGAGTTGTATATAATGCAATGATTTACGCTTACGCCGAAGGAGGGGATGTTGAGAAGGCAATGACTTTGCACCAACGGATGGTAGAGCAGGGGATTAATTCGGACAAGGTAACTTATAACAGCTTAATTTTGGTATGCCTTAGAGATAAAAGGGCTTTGGAAGTAAAGCATGTTGTTCATGACATGAAGGCTAAAGGAGTGGTTCCAAAAGCTGATACATATAACATACTGGTGAAGGGATGTTGTGATTTGAAGGATTTCAAAGAGGCGTACTTTTGGTATAAAGAAATGTCTGACAAAGGTTTTTCCGTAAACGAACGCATCTCGTATCAACTTATCTCGGGACTCAGTTACAAGGGTATGCTACAAGAAGCTCAAATTGTTTCCTCAGACTTGAGTTGCAGGGCATAA 2418 0.4218 MGRRAALVLLPKLRGSLRKELCNSVRVPLSLCFCSEPVSETLAETHHTQINQLSVEFNKQSYSQEEERLEQVRKFRNLLEEGRGHDVQRFIKSLVLSKNPFSSPFDLHAYFSLSALSLKPVFSNLLFRACSESEMVNEAMELYYLMRKDGMLPSTGSVNRLLETLIILKQYKKILDLFPDFVESGIQPNTFSYSKAVQAAVMLKDLQRALELIKDMEEGGVSPSSFIYNLVIGGLCKERRITDAHNLFDEMIQRKLVPNLVTYNTLIDGYCKLGEIERALALRERMRVENVKPNLVTQNSLLRGFYDSQRMAEARTLLQEMEANKFLPVGFTVIVFDDVSSGNINISLDKEGTINEYTCSILLDGLCRAGMVEKAKEVLAKLTESGLIPSKIVYNVLVNAYCREGDIEKAILTIEQMEERGLEANYVTFNTLINKFFKMKEVDQAERWLKKMAEKGVSPSLETYNILINGYGCISQFEKCFQILEEMERAGIEPSVSSYGLLVNCLCKGGKLLEAELILVDMANRGVSPNAEIYNMLIEGSCSMGKITDALRFFEEMFKNGPGPTLVTYNTLIYGLGKDGRITEAEKFFQQMGSNGYNPDVISYNSLISGYARSGNTQKCLELYDNMKKVGIKPTVRTFHPLINASIKEGVVTAERLFQEMLEMGVVPNRVVYNAMIYAYAEGGDVEKAMTLHQRMVEQGINSDKVTYNSLILVCLRDKRALEVKHVVHDMKAKGVVPKADTYNILVKGCCDLKDFKEAYFWYKEMSDKGFSVNERISYQLISGLSYKGMLQEAQIVSSDLSCRA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1159 805 Pfam PPR repeat 393 422 IPR002885 -
Lele07g1159 805 Pfam PPR repeat 671 701 IPR002885 -
Lele07g1159 805 Pfam PPR repeat 124 150 IPR002885 -
Lele07g1159 805 Pfam PPR repeat 357 387 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 704 738 IPR002885 -
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 546 652 IPR011990 GO:0005515
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 434 545 IPR011990 GO:0005515
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 189 223 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 294 328 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 565 599 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 530 564 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 224 258 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 425 459 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 600 634 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 739 773 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 669 703 IPR002885 -
Lele07g1159 805 Pfam PPR repeat family 425 471 IPR002885 -
Lele07g1159 805 Pfam PPR repeat family 599 645 IPR002885 -
Lele07g1159 805 Pfam PPR repeat family 704 752 IPR002885 -
Lele07g1159 805 Pfam PPR repeat family 223 272 IPR002885 -
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 346 419 IPR011990 GO:0005515
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 390 424 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 259 293 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Lele07g1159 805 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 389 616 - -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 653 803 IPR011990 GO:0005515
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 101 241 IPR011990 GO:0005515
Lele07g1159 805 Gene3D Tetratricopeptide repeat domain 242 345 IPR011990 GO:0005515
Lele07g1159 805 SUPERFAMILY HCP-like 670 771 - -
Lele07g1159 805 SUPERFAMILY HCP-like 393 633 - -
Lele07g1159 805 Pfam Pentatricopeptide repeat domain 518 575 IPR002885 -
Lele07g1159 805 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 119 153 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 742 775 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 427 460 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 706 738 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 533 561 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 261 294 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 567 601 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 602 636 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 124 154 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 227 259 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 296 328 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 671 702 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 357 390 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 463 496 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 498 531 IPR002885 -
Lele07g1159 805 TIGRFAM PPR: pentatricopeptide repeat domain 392 425 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1159 Lele-ChrLele07 7003788 7006205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1159 370 805 Glycosyltransferase AT1G05670 28.571 1.31e-61 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1117 05 6972747 6975218 Lele07g1159 07 7003788 7006205 hybridization