Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1063 ATGGCTCCTGCCCCCATTCTTCATCTTCTCTGCCTCTTTTCTCTCATCTCCTTCACTTCATCCTTCGCATCCATTACTCTTCCTATCTCGCCCTTACACGCCAAACACCCTTCTTCCGATCCCTTTCAGACCCTCAAAGTCGTTGCCTCTGCTTCCCTGACCAGAGCTCACCACCTCAAGCACCGTAAATCCAATTCCAATTCTTCTCTCACCAAGACCCCCGATTACCCCAAAAGCTACGGCGGATACTCCGTCGATCTCAGATTCGGCACGCCGCCTCAAACCTTCCCTTTCGTCTTGGACACCGGAAGTAGCCTCGTCTGGTTCCCTTGCTCCTCTCATTATCTCTGTTCCAGATGTTCCTTCCCCGCCATCGATGCCACTAAACTCCCCAAGTTCATCCCTAAGAATTCTTCCTCCGCCAAGTTCGTCGGTTGCAGAAATCCAAAATGTGGTTGGATTTTCGGCCCCGATCTTCAGTCTCGATGCCAGAAATGCGAACCCACTGCCCAGAACTGCTCACAGATTTGCCCCACTTATATGATTCAGTATGGTTCGGGCTTAACCGCTGGCTTGTTACTCTTAGAAAGCCTCGACCTTCCTGGGAAAATCGTGCCCGATTTTCTAGTCGGTTGCTCCATCATGTCGATCCGTCAACCCGCCGGAATCGCTGGGTTTGGTCGAGGGCCTGAATCGCTGCCTTCGCAGATGGGTCTCAAGAGATTCTCTTACTGTTTGATCTCTCACCGGTTCGACGACACCACCGAAAGCAGTGACCTCATTCTTCAGAGTGAGTCCTCTGGTGGCACTAAAACCGATGGACTTAGCTACACTCCATTCCAGAAAAACCCAGCTGCGAACAACCCAGCATTCCGCGAGTATTATTACTTAACCATTCGAAAAATCATCATCGGTGGCGAGCTAGTCAAGATTCCGTCCAAGGTTTTTGAGCCAGATTCAGACGGGAATGGGGGCACCGTAGTGGACTCAGGCTCCACCTTCACATACATGGAAAGGCCCATTTTAGATATGGTGGCACAAGCATTGGAGAAACAGATGGCAAATTATACAAGAGCCAAGGACGTAGAAACCCAATCCGGTTTGAGCCCCTGTTTCGATTTTTCAGGTCTGGACTCGATTAATTTCCCGGAATTCACTATCAAATTCAGAGGGGGAGCCAACATGACATTGCCCGTGGAGAACTATTTCTCGTTGGTGGGCGAATCGCAGGTTGCCTGCCTGACGGTTCTCTCGGACAATGGGACCATCCCGGCGGTGGTCAGGGGGCCGGCGGTGATTCTAGGAAACTATCAGCAGCAGAATTTCTACGTGGAATATGACTTGGAAAATGAGAGGTTTGGATTTGGACCTCGAAGTTGCAAGAAGGGAACTTAG 1395 0.5061 MAPAPILHLLCLFSLISFTSSFASITLPISPLHAKHPSSDPFQTLKVVASASLTRAHHLKHRKSNSNSSLTKTPDYPKSYGGYSVDLRFGTPPQTFPFVLDTGSSLVWFPCSSHYLCSRCSFPAIDATKLPKFIPKNSSSAKFVGCRNPKCGWIFGPDLQSRCQKCEPTAQNCSQICPTYMIQYGSGLTAGLLLLESLDLPGKIVPDFLVGCSIMSIRQPAGIAGFGRGPESLPSQMGLKRFSYCLISHRFDDTTESSDLILQSESSGGTKTDGLSYTPFQKNPAANNPAFREYYYLTIRKIIIGGELVKIPSKVFEPDSDGNGGTVVDSGSTFTYMERPILDMVAQALEKQMANYTRAKDVETQSGLSPCFDFSGLDSINFPEFTIKFRGGANMTLPVENYFSLVGESQVACLTVLSDNGTIPAVVRGPAVILGNYQQQNFYVEYDLENERFGFGPRSCKKGT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1063 464 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 98 109 IPR001969 GO:0004190|GO:0006508
Lele07g1063 464 PANTHER OS07G0603500 PROTEIN-RELATED 34 461 - -
Lele07g1063 464 FunFam Aspartic proteinase nepenthesin-2 56 260 - -
Lele07g1063 464 CDD pepsin_A_like_plant 82 460 IPR034161 -
Lele07g1063 464 SUPERFAMILY Acid proteases 79 460 IPR021109 -
Lele07g1063 464 Coils Coil 346 366 - -
Lele07g1063 464 ProSiteProfiles Peptidase family A1 domain profile. 83 456 IPR033121 -
Lele07g1063 464 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Lele07g1063 464 PRINTS Pepsin (A1) aspartic protease family signature 432 447 IPR001461 GO:0004190|GO:0006508
Lele07g1063 464 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Lele07g1063 464 Gene3D Acid Proteases 56 257 IPR021109 -
Lele07g1063 464 Gene3D Acid Proteases 264 464 IPR021109 -
Lele07g1063 464 Pfam Xylanase inhibitor C-terminal 295 456 IPR032799 -
Lele07g1063 464 Pfam Xylanase inhibitor N-terminal 83 261 IPR032861 -
Lele07g1063 464 FunFam Aspartyl protease family protein 266 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1063 Lele-ChrLele07 6428148 6429542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1063 76 462 Miscellaneous Gene Families AT1G77480 25.532 3.35e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1063 07 6428148 6429542 Lele07g1063 07 6428148 6429542 ECH
Lele05g1025 05 6382904 6384298 Lele07g1063 07 6428148 6429542 hybridization
Lele06g0886 06 5521729 5523123 Lele07g1063 07 6428148 6429542 hybridization