Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1010 ATGGATAATCAACAAATAAGTGATTTAGCCGATGAGAAATTCACATGGAGAATTGAAAACTTCTCCAGGTTGAAGTCTAAAAAATTGTATTCCGAGACTTTCATTCTGGGCGGCTATCCATGGTATTCGATTGAATTTCCTTTTGGTTGGAATTTTCTGAATATTTATTTCCTGTTTGACATAATTTGCATTTGTGTTTTGAATGTGATTTTGCTTGGGCCTCCTTATAGGAGGATTCTTATATATCCTAAAGGGAACAATGTTGATTACTTGTCTTTATATTTGGATACTGCGGATGCCAAGAGTTTATCTGCTGGTTGGTCCAGATATGCAAGTTTCCGCTTGGCGGTAATTGATCAAGTAAATACGCAGACCACGGTCACAAAAGAGACCCAACATCAATTCAATCCAAGAGAGAGTGACTGGGGGTTCACATCATTTATAACTTTGAGTGAACTTCATGACCCTAAGAAGGGTTATATTGTAAAAGATACATGTGTAATTCATGTTGAGGTTTCTATTCCCAAGTCTGGAGTAGAGAATCAAGTAGATCAAGCATCTGGCGCAATATCCCTGGATTCTGGAGATAAAATTGGACAAATGCAAGTGGAAATTCCACAGCAAGAAGCTAAAACTTCACCACCTTCTGCGTGTGTTTCCATTGAGCCTGCTCAGCATACTGTTAACCCTTCATTGTCTGTAGGACTAACCTCAAACCCAATGGATGAGCTTTTGGATTTCAGGGGTCTTGGGAAGATAGAAAATGTTTTTGTCCTACTCCTGGAGGAAGTATGTTCCAAGCACCCATCACTCATTGAATGTCAGCAGAAGAGAACAGGACGATTTGTTGAATGGGCATTCACAGCTTTGGGCAGAGTTCTACATTTCTTGAAGACTAAAAGGGTGAAAGACATGAATGATGAGACTTGTGAGCATCTTCAAATTTTATGGGAAGAACTTGAGACATTTAGATTTGATTTGACTTGGTTGGAGCCTCATGTTCAATCTGCCTTAGACATGAAGAACTACTTGGAGCAGGCAATGCAGGTGAAGAAGTTGAAGGATAATGTGAGTGCTCTCGAGATGGAAATGAAGAGGCTTAAAGCAAAACTTGCTTCTGTAGAGATAGATCTTGAAATAGCAAAAGGAGACTTGGTGCAAGCAGAAGAAGGGTTTGAAGAGAGGGATTTGGATGGTGAACTCGGATATGGGAGACCATAG 1221 0.3997 MDNQQISDLADEKFTWRIENFSRLKSKKLYSETFILGGYPWYSIEFPFGWNFLNIYFLFDIICICVLNVILLGPPYRRILIYPKGNNVDYLSLYLDTADAKSLSAGWSRYASFRLAVIDQVNTQTTVTKETQHQFNPRESDWGFTSFITLSELHDPKKGYIVKDTCVIHVEVSIPKSGVENQVDQASGAISLDSGDKIGQMQVEIPQQEAKTSPPSACVSIEPAQHTVNPSLSVGLTSNPMDELLDFRGLGKIENVFVLLLEEVCSKHPSLIECQQKRTGRFVEWAFTALGRVLHFLKTKRVKDMNDETCEHLQILWEELETFRFDLTWLEPHVQSALDMKNYLEQAMQVKKLKDNVSALEMEMKRLKAKLASVEIDLEIAKGDLVQAEEGFEERDLDGELGYGRP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1010 406 SMART math_3 13 153 IPR002083 GO:0005515
Lele07g1010 406 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 76 190 IPR008974 GO:0005515
Lele07g1010 406 SUPERFAMILY TRAF domain-like 78 177 - -
Lele07g1010 406 Pfam MATH domain 18 174 IPR002083 GO:0005515
Lele07g1010 406 SUPERFAMILY TRAF domain-like 10 52 - -
Lele07g1010 406 CDD MATH 13 172 IPR002083 GO:0005515
Lele07g1010 406 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 57 - -
Lele07g1010 406 Coils Coil 343 384 - -
Lele07g1010 406 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 59 IPR008974 GO:0005515
Lele07g1010 406 ProSiteProfiles MATH/TRAF domain profile. 11 172 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1010 Lele-ChrLele07 6073472 6075099 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1010 07 6073472 6075099 Lele07g1010 07 6073472 6075099 ECH
Lele05g0971 05 6000406 6002484 Lele07g1010 07 6073472 6075099 hybridization