Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0748 ATGGATTTCATTGCAACAGGCGGCTTCATGCTTGACACGACGAGGCGTCTGAGCGTTTCGAATTGGAAAGAGAGAGCAGGAGACTGGACACTCAATGAGTACACTGGCGAACTAGGCAAACGGGTTTCAATTAGATTGTGGGAAAAGGAGAAAGAGGGGAGTCTTCTGGAATCTGCAAAAGAGGTAGAACTAGATTCAAGTTCATCCTTGGTTGTTAAAATCGCCGCAGAGGACAGTAAAACGAACGTGCCAATGGCAAAAGTGCCGTTTCATATACCAACTATTACGAAGCCTCAAGATGAGTATAACATGGTAGTTAATAATTCAAACCAACCTTTTGATCATGTCTGGTTGCAAAGGAGTGACGATGTTCAGAAGTTTATTCATCCTCTGGAGAACCTCTCTGCATTGGATTTTGTTGATAAAGATTGTGGGGATATTGAGCCAATAAGGCCTCCCTCGATTGATTGTACCCCTTTAAAGATAGTGACGGATGTCAAGGATTTGAAGGAGTTGGCTGCCAAGCTGCGTGCTGCTAAAGAATTTGCGGTGGATCTAGAACATAATCAATATCGGTCTTTTCAAGGATTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTGTGATAGACACTCTGAAGCTGCGTATTCATGTTGGGCCTTATCTAAGGGAAGTTTTCAAAGATCCTACCAAGAGAAAGGTTATGCATGGAGCAGATCGAGATGTACTGCTTTTGTTGTTGTGGTTGTTGTCATCTCAGGCCTCAAGAGTATTAAAATTGGAAAGAAATAGTTTAGAGTATCTTCTACATCACTATTGCGGGGTTACTGCAGACAAAGAATACCAGGGTGCCGATTGGAGACTGCGTCCTCTTCCTAATCAGATGCTTAGATATGCCAGAGAAGATACCCACTTTCTTCTGTATATATATGATTTAATGAGAGTGAAGTTATTTGGATTGTCCAAAGACCCTCAAAGTTCTGATAATCCTCTGCTGGAGGTGTACAAGCTCAGTTATGATGTCTGCATGAAGCTATATGAGAAAGAACTTCTGACTGAGAACTCCTTCCTATCCATATATGGGTTGCAAGGGGCTGGTTTTAATGCTCAGCAATTGGCTGTTGTTTCGGGGCTTTATGAATGGCGGGATATTGTTGCTCGTGCAGAGGATGAGAGCACTGGCTATGTGTTGCCAAATAAAACTCTTCTGGAAATTGCTAAGCAGATGCCTGTAACAAGAGAGAGACTACAAAAATTGACAAAGTCAAAGCACCCGTATGTTGAGCGCAACTATGATAGCATTGTCAGCATCATTATACATTCTCTGCAAAATGCTCCTGCCTTTGAAGCAATGGCACAACAATTGAAAGAGAGACGTGTCACAAATGCAAGAAAAGAAAGTATTGGAGTTGAAAGTGCCAAATCACCTTTTCCTTTTTCCCTGAAAATGGATACTCTTCAGCATCAAAATAAACCTGGACAGCTTAAATTTGGATCAAATAGTCCTACTTCAGAATTCTCTCACGGCAGTCTCAATATTTCACAACAGAACAGGGTAGCTATTTCTAATCATGTAAAGGAAGAGGTCAAGCTAGAGCAGATTAGATTCTCTGCCAATCTTCCTCCTCGTCCATTTTTTGGTAGCATTGAAATCACAAATCAGCTCAGGGAGAGAAGTTCTGCGTCCAACATTTCAGATAAAGAGGAAGATGAGCCAATGTGTTAG 1734 0.4164 MDFIATGGFMLDTTRRLSVSNWKERAGDWTLNEYTGELGKRVSIRLWEKEKEGSLLESAKEVELDSSSSLVVKIAAEDSKTNVPMAKVPFHIPTITKPQDEYNMVVNNSNQPFDHVWLQRSDDVQKFIHPLENLSALDFVDKDCGDIEPIRPPSIDCTPLKIVTDVKDLKELAAKLRAAKEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVIDTLKLRIHVGPYLREVFKDPTKRKVMHGADRDVLLLLLWLLSSQASRVLKLERNSLEYLLHHYCGVTADKEYQGADWRLRPLPNQMLRYAREDTHFLLYIYDLMRVKLFGLSKDPQSSDNPLLEVYKLSYDVCMKLYEKELLTENSFLSIYGLQGAGFNAQQLAVVSGLYEWRDIVARAEDESTGYVLPNKTLLEIAKQMPVTRERLQKLTKSKHPYVERNYDSIVSIIIHSLQNAPAFEAMAQQLKERRVTNARKESIGVESAKSPFPFSLKMDTLQHQNKPGQLKFGSNSPTSEFSHGSLNISQQNRVAISNHVKEEVKLEQIRFSANLPPRPFFGSIEITNQLRERSSASNISDKEEDEPMC 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0748 577 SMART 35exoneu6 160 321 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele07g0748 577 Pfam 3'-5' exonuclease 161 319 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele07g0748 577 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 72 496 IPR045092 GO:0000175|GO:0000467
Lele07g0748 577 FunFam Putative exosome component 10 358 453 - -
Lele07g0748 577 SUPERFAMILY Ribonuclease H-like 95 323 IPR012337 -
Lele07g0748 577 FunFam Protein RRP6-like 2 isoform A 94 356 - -
Lele07g0748 577 Gene3D - 88 359 IPR036397 GO:0003676
Lele07g0748 577 SUPERFAMILY HRDC-like 355 446 IPR010997 GO:0000166|GO:0044237
Lele07g0748 577 Coils Coil 169 189 - -
Lele07g0748 577 SMART hrdc7 371 450 IPR002121 GO:0003676
Lele07g0748 577 ProSiteProfiles HRDC domain profile. 371 451 IPR002121 GO:0003676
Lele07g0748 577 Gene3D HRDC domain 360 455 IPR044876 -
Lele07g0748 577 Pfam HRDC domain 374 441 IPR002121 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0748 Lele-ChrLele07 4229187 4233545 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0748 07 4229187 4233545 Lele07g0748 07 4229187 4233545 ECH
Lele05g0707 05 4164561 4168728 Lele07g0748 07 4229187 4233545 hybridization