Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0716 ATGAATTGTCACCCGTCTTCCTGCATAAGGTGGTTCCGTGATGTATATTGCTTAATATTTTACACAATCATGCATGATTATAGGATTATTGATATTGACATGATGGGTGAGGTGGTGGGAACTCCTTACACACAGCAATCCTGCAAAGTGAGTGAGTCATTTCCTTTCAAGTGGATCAATAAGAAGTGGAAAAAAGGATTCCATGTTACCTCCATGTGTGCTAGTTTCTGGGACACAAATTTGGTGTATCCTTGGAAGAAAGGAATCAAAATCAGAAAGATGAGACCTCCGATGGGTGGCCGCGCCGGCGGCTTTAGAGGTGGCCGAGGCGGCGGCAGTCGTGGTGGAGGCGGCTTTCGTGATGAAGACGTCTCAACATTTCTACATGCATGTGAGGGAGACGCAGTTACAAAGCTTACAAATGAAAAGGTTCCCATGTTTAATGCTCCTATATATCTGCAGAATATGACTCCGATTGGGAAAGTTGATGAAATATTTGGCCCCATAAATGAGGCTTATTTTTCAATAAAGATGATGGAAGGGATTGTGGCAACTTTATATTCATCTGGCGACAAATTTTATATTGATCCAAGGAAATTGTTGCCTCTTGCTAGATTTCTGCCACAACCCAATGGTTGCTTAAATTTTATACTTGCACGTGCCATGCTGGCATTGCTGGTTAATGTTATGTGGTCGTTGGAATTCAATCAAATTGAACATGATTGGTTGGTTGCTGTTGCAGGGGGCAGACCCAAGCTTCTAGAGGTGGAGGTCGTGGTGGAGGCAGAGTTTTCCGTGGGGTTGGTAGCTTCCGAGGAAGGAGTGGCCCAAGAGGTGGGAGAGGTGGACCTCCTAGGGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAAGAGACGTCTGTGTAATATTATCTTGAATCATCTGTTTTGA 930 0.4462 MNCHPSSCIRWFRDVYCLIFYTIMHDYRIIDIDMMGEVVGTPYTQQSCKVSESFPFKWINKKWKKGFHVTSMCASFWDTNLVYPWKKGIKIRKMRPPMGGRAGGFRGGRGGGSRGGGGFRDEDVSTFLHACEGDAVTKLTNEKVPMFNAPIYLQNMTPIGKVDEIFGPINEAYFSIKMMEGIVATLYSSGDKFYIDPRKLLPLARFLPQPNGCLNFILARAMLALLVNVMWSLEFNQIEHDWLVAVAGGRPKLLEVEVVVEAEFSVGLVASEEGVAQEVGEVDLLGVVVSGEGGDHKRRLCNIILNHLF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0716 309 FunFam H/ACA ribonucleoprotein complex subunit 121 208 - -
Lele07g0716 309 Pfam Gar1/Naf1 RNA binding region 124 207 IPR007504 GO:0001522|GO:0042254
Lele07g0716 309 Gene3D Probable tRNA pseudouridine synthase domain 121 208 IPR038664 -
Lele07g0716 309 SUPERFAMILY Translation proteins 124 196 IPR009000 -
Lele07g0716 309 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 102 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0716 Lele-ChrLele07 4057121 4060584 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0716 07 4057121 4060584 Lele07g0716 07 4057121 4060584 ECH
Lele05g0681 05 4018640 4020415 Lele07g0716 07 4057121 4060584 hybridization
Lele06g0508 06 3084196 3086276 Lele07g0716 07 4057121 4060584 hybridization