Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0681 ATGAGACCTCCGAGGGGTGGCCGTGGCGGCGGCTTTAGAGGTGGCCGAGATGGTGGACGCGGCGGCGGATTTAGAGGTGGCCGAGGCGGCGGAGGTCGTGGTGGAGGCGGCTTTCGTGATGAAGGTCCTCCCACCGAAGTAATAGAGGTCTCAACATTTCTACATGCATGTGAGGGAGACGCAGTTACCAAGCTTACAAATGAAAAGGTTCCCATGTTTAATGCTCCTATATATCTGCAGAATATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCCATAAATGAGGCTTATTTTTCAATAAAGATGATGGAAGGGATTGTGGCAACTTCATATTCATCTGGCGACAAGTTTTATATTGATCCAAGGAAATTGTTGCCTCTTGCTAGATTTCTGCCACAACCCAAGGGGCAGACCCAAGCTTCTAGAGGTGGAGGCCGACTTGGAGGCCGTGGTGGAGGCAGAGGTTTCCGTGGGGGTGGTGGCTTCCGAGGAAGGGGTGGCCCAAGGGGTGGGAGAGGTGGACCTCCTAGGGGTGGTGGTTTCAGGGGAAGGGGGAGATCATAG 570 0.5281 MRPPRGGRGGGFRGGRDGGRGGGFRGGRGGGGRGGGGFRDEGPPTEVIEVSTFLHACEGDAVTKLTNEKVPMFNAPIYLQNMTQIGKVDEIFGPINEAYFSIKMMEGIVATSYSSGDKFYIDPRKLLPLARFLPQPKGQTQASRGGGRLGGRGGGRGFRGGGGFRGRGGPRGGRGGPPRGGGFRGRGRS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0681 189 MobiDBLite consensus disorder prediction 133 189 - -
Lele05g0681 189 Pfam Gar1/Naf1 RNA binding region 47 133 IPR007504 GO:0001522|GO:0042254
Lele05g0681 189 SUPERFAMILY Translation proteins 49 122 IPR009000 -
Lele05g0681 189 MobiDBLite consensus disorder prediction 1 44 - -
Lele05g0681 189 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 8 186 - -
Lele05g0681 189 Gene3D Probable tRNA pseudouridine synthase domain 43 134 IPR038664 -
Lele05g0681 189 FunFam H/ACA ribonucleoprotein complex subunit 43 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0681 Lele-ChrLele05 4018640 4020415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0681 05 4018640 4020415 Lele05g0681 05 4018640 4020415 ECH
Lele05g0681 05 4018640 4020415 Lele07g0716 07 4057121 4060584 hybridization