Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0394 ATGAGGTGGGGACCGGATATTTTGAGCGTGGGCCCCCCTTCAACACAAAAACATGCGCATAAACCAATTGAAAATGGGTTATTCTCAAAAGGGAATACAGAGTCCTACTGTCGCCGTTCGCCACGTCACCACCTCCTTCCTCCCTCGACTCCGTTTCTCTTCCCTGGCTGCTACTTTAAATTCGCCTCTTCTGGAAGCACCAAATCGCACTTCTCACTTCGACGAAAATCTGCTTCACTTTCTCACTCTATCTTTCTTGATCACTCAACTCACTGCGAGGAACTTTCTTCGAGTTCTCAATTCTGCCCCCAGAAGCCGATCATGTCTCAGCGCAAGCTTGATCGAGTTCCTAGTATCAGAGACCGAGTAGAGGATACTCTCTCCGCTCATCGCAACGAACTTGTCTCTCTCCTCTCCAGGTATGTGGATCAGGGGAAACGGATTTTGCAACCCCATAATTTGATTGATGAGCTCGAAAACATCCTCGGTGAGGACGAAGCATCACAGGAAATTAAAAATGGCCCCTTCGGCGAAATCCTCAAATCAGCACAGGAAGCCATAGTTCTGCCTCCTTTTGTGGCGATTGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTTTATGAACTTAGTGTGGAGCAATTGACTGTTCCTGAATATCTTCACTTCAAAGAGGAGCTTGTAGATGGAACGGCTCATGACAATTTTGTATTGGAGCTTGATTTCGAACCATTCAATGCTACATTTCCTCGTCCATCTCGATCATCATCCATTGGCAATGGTGTTCAATTTCTCAACCGTCACCTTTCGTCAATTATGTTTCGGAACAAGGAATCTTTGGAGCCATTACTCGATTTCCTCAGACTTCACACTTATAAAGGGCATACGCTGATGTTAAATGACCGTATCCAGAGCATCTCCAAACTTCAGTCAGCTTTGGTCAAGGCTGAGGAGTATCTCACTAAGCTTAAACCTGATACAGGCTATTCTGAGTTTGAATATGTATTTCAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAAAGAGTGTTGGAGATGATGCATCTTCTCTTGGACATTCTACAGGCTCCTGATCCTTCTACTTTAGAGACGTTTCTTGGGAGAGTACCTATGGTGTTTAACGTTGTTATATTATCTCCTCATGGATACTTTGGTCAAGCCAATGTGTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATATTGGATCAAGTGCGTGCCCTTGAGAATGAGATGCTTCTTAGAATCAAGAAGCAAGGACTTGATTTCACTCCAAGAATTCTAATTGTTACCAGGTTGATACCTGATGCAAAGGGGACAACCTGCAATCAGCGGCTAGAAAGAGTCAGTGGCACTGAACACACTCATATTTTGCGAGTTCCTTTCAGATCAGATACAGGAATTCTACGTAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAGGGATATCCTGATTTCATCATTGGAAACTACAGTGATGGAAACCTTGTTGCGTCTTTATTAGCTTATAAGATGGGAGTGACACAGTGCACAATTGCGCATGCACTAGAGAAAACCAAATATCCTGATTCAGATATATTTTGGAAAAAGTTTGAGGAGAAGTATCATTTTTCTTGCCAATTCACTGCTGACCTAATAGCAATGAACAATGCTGACTTTATCATCACCAGTACATATCAAGAGATTGCGGGAACGAAGAATACTGTTGGCCAATATGAGAGCCACACTGCATTTACTCTTCCTGGGCTCTACAGGGTTGTCCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGGGCAGATATGAGCATCTACTTTCCCTACTCTGCAAAGCAGAAAAGACTAACTGCCCTGCATGGTTCAATTGAAAAGCTGTTATTTGATCCTGAACAAACTGATGAGCACGTGGGTACTCTTAAAGACCGGTCTAAACCCATAATATTTTCCATGGCGAGGTTAGACCGGGTGAAAAACATTTCTGGCTTGGTAGAATGCTATGGTAAGAACAGCAAATTGAGGGAACTGGTCAACCTGGTTGTGGTAGCTGGCTATATTGATGTGAAGAAGTCCAGGGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGATTTCATGAAGAAATACAATTTAGATGGTGATTTTCGCTGGATAGCTGCCCAAACCAATAGGGCACGTAATGGTGAGCTGTATCGCTACATAGCAGACACCAAAGGTGTTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTGACAGTTGTGGAGGCCATGACTTGTGGGCTGCCAACGTTTGCTACTTGCCACGGTGGTCCTGCTGAGATAATTGAGCATGGTGTATCAGGATTTAACATCGATCCTTATCACCCTGACCAAGCTTCTGAACTATTGGTTGATTTCTTCCAACGATGCAAGGAGGACCCAAGCCACTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAGAGGTACACATGGAAGATCTATTCTGAGAGGCTTATGACCTTGGCGGGAGTTTATGGTTTCTGGAAGCATGTGTCCAAACTGGAGAGGCGTGAGACCCGACGATATCTCGAGATGTTCTACATCCTCAAGTTCCGTGATTTGGCAAATTCTGTCCCGCCAGCAAAGGATGATGCAAATTAA 2757 0.4385 MRWGPDILSVGPPSTQKHAHKPIENGLFSKGNTESYCRRSPRHHLLPPSTPFLFPGCYFKFASSGSTKSHFSLRRKSASLSHSIFLDHSTHCEELSSSSQFCPQKPIMSQRKLDRVPSIRDRVEDTLSAHRNELVSLLSRYVDQGKRILQPHNLIDELENILGEDEASQEIKNGPFGEILKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLTVPEYLHFKEELVDGTAHDNFVLELDFEPFNATFPRPSRSSSIGNGVQFLNRHLSSIMFRNKESLEPLLDFLRLHTYKGHTLMLNDRIQSISKLQSALVKAEEYLTKLKPDTGYSEFEYVFQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSDTGILRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIFWKKFEEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSAKQKRLTALHGSIEKLLFDPEQTDEHVGTLKDRSKPIIFSMARLDRVKNISGLVECYGKNSKLRELVNLVVVAGYIDVKKSRDREEIAEIEKMHDFMKKYNLDGDFRWIAAQTNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFNIDPYHPDQASELLVDFFQRCKEDPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLANSVPPAKDDAN 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0394 918 TIGRFAM sucr_synth: sucrose synthase 131 911 IPR012820 GO:0005985|GO:0016157
Lele07g0394 918 FunFam Sucrose synthase 118 254 - -
Lele07g0394 918 Pfam Glycosyl transferases group 1 667 848 IPR001296 GO:0016757
Lele07g0394 918 Gene3D - 255 384 - -
Lele07g0394 918 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g0394 918 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 404 872 - -
Lele07g0394 918 FunFam Sucrose synthase 389 669 - -
Lele07g0394 918 Gene3D Glycogen Phosphorylase B; 636 863 - -
Lele07g0394 918 Pfam Sucrose synthase 115 662 IPR000368 GO:0005985|GO:0016157
Lele07g0394 918 PANTHER - 114 915 IPR012820 GO:0005985|GO:0016157
Lele07g0394 918 Gene3D - 118 254 - -
Lele07g0394 918 FunFam Sucrose synthase 255 384 - -
Lele07g0394 918 Gene3D Glycogen Phosphorylase B; 389 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0394 Lele-ChrLele07 2231546 2237769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0394 108 916 Glycosyltransferase AT4G02280 83.807 0.0 1440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0394 07 2231546 2237769 Lele07g0394 07 2231546 2237769 ECH
Lele05g0377 05 2156743 2161772 Lele07g0394 07 2231546 2237769 hybridization
Lele06g0193 06 1193910 1198962 Lele07g0394 07 2231546 2237769 hybridization