Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0377 ATGTCTGAGCGCAAGCTTGGTCGAGTTCCCAGTATCAGAGACCGAGTAGAGGATACTCTCTCCGCCCATCGCAACGAACTTGTCTCTCTCCTCTCCAGGTATGTGGATCAGGGGAAACGGATTTTGCAACCCCATAATTTGATTGATGAGCTCGAAAACATCCTCGGTGAGGACGAAGCATCCCAGGAAATTAAAAATGGCCCCTTTGGCGAAATCCTCAAGTCAGCACAGGAAGCCATAGTTCTGCCTCCTTTTGTGGCGATTGCAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTTTATGAACTTAGTGTGGAGCAATTGACTGTGCCTGAATATCTTCACTTCAAAGAGGAGCTTGTTGATGGAACGTCTCATGACAATTTTGTATTGGAGCTTGATTTCGAACCATTCAATGCTACATTTCCTCGTCCATCTCGATCATCATCCATTGGCAATGGTGTTCAATTTCTCAACCGTCACCTTTCGTCAATTATGTTTCGCAACAAGGAATCTTTGGAGCCTTTACTTGATTTCCTCAGACTTCACACTTATAAAGGGCATACACTGATGTTAAATGACCGTATCCAGAGCATCTCCAAACTTCAGTCAGCTTTGGTCAAGGCTGAGGAGTATCTCACTAAGCTTAAACCTGATACAGGCTATTCTGAGTTTGAATATGTATTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTGAAAGAGTGCTGGAGATGATGCATCTTCTCTTGGACATTCTACAGGCTCCTGATCCTTCTACTTTAGAGACGTTTCTCGGGAGAGTACCTATGGTGTTTAACGTTGTTATATTATCTCCTCATGGATACTTTGGTCAAGCCAATGTGTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATATTGGATCAAGTGCGTGCCCTTGAGAATGAGATGCTTCTTAGAATCAAGAAGCAAGGACTTGATTTCACCCCAAGAATTCTAATTGTTACCAGGTTGATACCTGATGCAAAGGGGACAACCTGCAATCAGCGGCTAGAAAGAGTCAGTGGGACTGAACACACTCATATTTTGCGAGTTCCTTTCAGATCAGATACAGGAATTCTACGTAAATGGATCTCAAGGTTTGATGTATGGCCTTATCTGGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAGGGTTATCCTGATTTCATCATTGGAAACTACAGTGATGGAAACCTTGTTGCGTCTTTATTAGCTTATAAGATGGGAGTGACACAGTGCACAATTGCGCATGCACTAGAGAAAACCAAATATCCTGATTCTGATATATATTGGAAAAAGTTTGAGGAGAAGTATCATTTTTCTTGCCAATTCACTGCTGACCTAATAGCAATGAACAATGCTGACTTTATCATCACCAGTACATATCAAGAGATTGCTGGAACGAAGAATACGGTTGGCCAATATGAGAGCCACACTGCATTTACTCTTCCTGGTCTCTACAGGGTTGTCCATGGCATTGATGTTTTTGATCCTAAGTTCAATATTGTCTCTCCTGGGGCAGATATGAGCATCTACTTTCCCTACTCTGCAAAGCAGAAAAGACTAACCGCCCTGCATGGTTCAATTGAAAAGCTGTTATTTGATCCTGAACAAACTGATGAGCACGTTGGTACTCTTAAAGACCGGTCTAAGCCCATAATATTTTCCATGGCGAGGTTAGACCGGGTGAAAAACATTTCTGGCTTGGTAGAATGCTATGCTAAGAACAGCAAATTGAGGGAACTGGTCAACCTGGTTGTGGTAGCTGGCTATATTGATGTGAAGAAGTCCAGGGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGATCTCATGAAGAAATACAATTTAGATGGTGATTTTCGCTGGATAGCTGCCCAAACCAATAGGGCACGTAATGGTGAGCTGTATCGCTACATAGCAGACACCAAAGGTGTTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTGACAGTTGTGGAGGCCATGACTTGTGGGCTGCCAACGTTTGCTACTTGCCACGGTGGTCCTGCTGAGATAATTGAGCATGGTGTATCAGGATTTAACATCGATCCTTATCACCCTGACCAAGCTTCTGAACTATTGGTTGATTTCTTCCAACGATGCAAAGCTGACCCAAGCCACTGGAATAAAATATCTGATGGTGGTCTTCAAAGAATTTATGAGAGGTACACATGGAAGATCTATTCTGAGAGGCTTATGACCTTGGCGGGAGTTTATAGTTTCTGGAAGCATGTGTCCAAACTGGAGAGGCGTGAAACCCGACGATATCTCGAGATGTTCTACATCCTCAAGTTCCGTGATTTGGCAACTTCTGTTCCGCCAGCAAAGGATGATGCAAATTAA 2436 0.4335 MSERKLGRVPSIRDRVEDTLSAHRNELVSLLSRYVDQGKRILQPHNLIDELENILGEDEASQEIKNGPFGEILKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLTVPEYLHFKEELVDGTSHDNFVLELDFEPFNATFPRPSRSSSIGNGVQFLNRHLSSIMFRNKESLEPLLDFLRLHTYKGHTLMLNDRIQSISKLQSALVKAEEYLTKLKPDTGYSEFEYVLQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSDTGILRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSAKQKRLTALHGSIEKLLFDPEQTDEHVGTLKDRSKPIIFSMARLDRVKNISGLVECYAKNSKLRELVNLVVVAGYIDVKKSRDREEIAEIEKMHDLMKKYNLDGDFRWIAAQTNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFNIDPYHPDQASELLVDFFQRCKADPSHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKHVSKLERRETRRYLEMFYILKFRDLATSVPPAKDDAN 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0377 811 Gene3D Glycogen Phosphorylase B; 282 799 - -
Lele05g0377 811 FunFam Sucrose synthase 148 277 - -
Lele05g0377 811 Gene3D Glycogen Phosphorylase B; 529 756 - -
Lele05g0377 811 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Lele05g0377 811 TIGRFAM sucr_synth: sucrose synthase 24 804 IPR012820 GO:0005985|GO:0016157
Lele05g0377 811 Pfam Glycosyl transferases group 1 560 730 IPR001296 GO:0016757
Lele05g0377 811 Gene3D - 11 147 - -
Lele05g0377 811 FunFam Sucrose synthase 529 756 - -
Lele05g0377 811 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 765 - -
Lele05g0377 811 Gene3D - 148 277 - -
Lele05g0377 811 PANTHER - 8 808 IPR012820 GO:0005985|GO:0016157
Lele05g0377 811 FunFam Sucrose synthase 11 147 - -
Lele05g0377 811 FunFam Sucrose synthase 3 394 520 - -
Lele05g0377 811 CDD GT4_sucrose_synthase 280 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0377 Lele-ChrLele05 2156743 2161772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0377 1 809 Glycosyltransferase AT4G02280 83.931 0.0 1444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0377 05 2156743 2161772 Lele05g0377 05 2156743 2161772 ECH
Lele05g0377 05 2156743 2161772 Lele07g0394 07 2231546 2237769 hybridization
Lele05g0377 05 2156743 2161772 Lele08g0201 08 1225212 1230807 hybridization