Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0359 ATGGCAACAATAAGTGGTGTGAGCCTTTCAAGTCCCAGACTTGTGCCTAGGGCATCAGACTCGTCGCAAAAGTCACACACCGTCAAGTTCCCACAGCTACCCATCCAAAGGTTTCCGGCCAAGTTTGGTTCGGGTCGCTTTCTTACTTCTGTTCGACCCGTGCGTACTGCTCCAGATGGAATATCCAACAAGGTTGAAGACAGCATAAAGAGCGCGGAGGAGGCATGCTCGGATGACCCAGCCGGCAGTGAATGTGCGGCGGCATGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCCAGCCACGCGAGGGACAGGAAGAAAGAATCCGACCCGCTCGAGAACTATTGCAAGGACAACCCGGAGACCGATGAGTGCCGCACTTACGATAATTGA 393 0.5573 MATISGVSLSSPRLVPRASDSSQKSHTVKFPQLPIQRFPAKFGSGRFLTSVRPVRTAPDGISNKVEDSIKSAEEACSDDPAGSECAAAWDEVEELSAAASHARDRKKESDPLENYCKDNPETDECRTYDN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0359 130 Pfam CP12 domain 61 129 - -
Lele07g0359 130 SMART CP12_2 61 130 IPR003823 -
Lele07g0359 130 MobiDBLite consensus disorder prediction 1 30 - -
Lele07g0359 130 MobiDBLite consensus disorder prediction 99 130 - -
Lele07g0359 130 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 5 130 IPR039314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0359 Lele-ChrLele07 1998323 1998715 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0359 07 1998323 1998715 Lele07g0359 07 1998323 1998715 ECH
Lele05g0341 05 1939560 1941812 Lele07g0359 07 1998323 1998715 hybridization
Lele06g0160 06 971520 971912 Lele07g0359 07 1998323 1998715 hybridization