Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0427 ATGGGTAGCACATTCAATCCACAGATATTGGTGGAAAAGTTAGCCAAGCTGAATAGTTCACAGGCGAGCATAGAGACTTTGTCTCATTGGTGCATTTTTCACATGAATAAAGCCAAACAAGTTGTTGAAACATGGGACAGACAATTCCGTTGTTCTCCTCGTGAACAAAGATTGGCATTTCTATATCTTGCCAATGATATATTGCAGAACAGCAGGCGAAAGGGTTCAGAATTTGTTGGTGAATTTTGGAGGGTTCTTCCAGATGCTCTTAGAGATGTGATTAATGATGGAGATGAATTTGGAAGGAATGCTGCACTTCGACTGATTGGTATTTGGGAAGAGAGGAAAGTTTTTGGTCCTCGTGGTCATATTCTTAAAGAAGAGTTTAATGGGAGGCATGTTGACAATGGTAGCCGTAATGGGAAATCCATGCCCTCAAAGCTGAGACCATCTGCTGGGAATACATTGGAGAAACTAGTTTCAGGTTATCAAGCTGTTTATGGAGAGCATGCAGATGAAGATGCTATATTGAGTAAATGCAGGAATGCCATTAGCTGTCTTGAGAAAGTAGACAAGGAAAATGGTCAAGAAAGTACTTCTGGGAAGATCCATGGATCAACGCTAGAGGATGAGCTCCAGGGACATGATACTGTATTGAGGGACTGCATTGAGCAATTAACAGCTATAGAATCATCAAGAGCAAGCCTTGTGTCTCATCTGAGAGAGGCTCTCCAGGATCAGGAATTCAAGCTGGATCAAGTCCGTAACCAGATCCAGGCTGCACGTGTTCAATCCGAACAAGTTGGTAATACCTGCCAGCGATCACTAAATGACACCAACATTCGGTCATTAGCTGCACAAAACTCAAAGGAAATTCAGACCTCCTTAACTCCTTCCAGCTTTATTCCTGGAGATAGGGAGCAGTCAGCTACATTGATGTGTACACAGCAAGTATCTTATCCCCAAAAATCTGGACACATTGAGGAAGATACACGTAAGTCTGCTGCTGCAGCAGTGGCGGCTAAGTTAACTGCATCAACATCATCTGCCCAGATGCTATCTTATGTTCTATCCTCCTTAGCATCTGAAGGGGTAATAGGCAATTCAATTAAAGAGTCTTCTGGTGGTGATTATCATCAGAAGAGGACCAAGCTGGATAATGACCAGTCATCTTATATACCATCTCATAATCCGCAACAACCGCTTCCTCCATTTTCTCTCCCTGAATCTCGACACAATGCATCTACAACCAATCAACAATCTACTCTCATTGAACTACCGCCTCCACCTTCATCATCTCCTCCCCTTTTGCCCCCACCACCACCAGTGCCCCAGTTCATGCAGACTGCTCGATCAATTAACAATGTAGCATATAGCTATGGCAGGACACAACAGCCATCAATGGCAGCCTACTCCCCTGTAGGTGCTTCCCTTGATGGTATTTCCCCTTATGCACCAGCTCCAGTGGGCACCTACCAGGGTTTTCAGGGTTCAGATGGTAACTACTATAACCAGCCCTCATCGATGCCTATGGCCCCTATCTCTCGGCAATGA 1554 0.444 MGSTFNPQILVEKLAKLNSSQASIETLSHWCIFHMNKAKQVVETWDRQFRCSPREQRLAFLYLANDILQNSRRKGSEFVGEFWRVLPDALRDVINDGDEFGRNAALRLIGIWEERKVFGPRGHILKEEFNGRHVDNGSRNGKSMPSKLRPSAGNTLEKLVSGYQAVYGEHADEDAILSKCRNAISCLEKVDKENGQESTSGKIHGSTLEDELQGHDTVLRDCIEQLTAIESSRASLVSHLREALQDQEFKLDQVRNQIQAARVQSEQVGNTCQRSLNDTNIRSLAAQNSKEIQTSLTPSSFIPGDREQSATLMCTQQVSYPQKSGHIEEDTRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNSIKESSGGDYHQKRTKLDNDQSSYIPSHNPQQPLPPFSLPESRHNASTTNQQSTLIELPPPPSSSPPLLPPPPPVPQFMQTARSINNVAYSYGRTQQPSMAAYSPVGASLDGISPYAPAPVGTYQGFQGSDGNYYNQPSSMPMAPISRQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0427 517 SMART 558neu5 9 130 IPR006569 -
Lele06g0427 517 MobiDBLite consensus disorder prediction 494 517 - -
Lele06g0427 517 MobiDBLite consensus disorder prediction 387 441 - -
Lele06g0427 517 MobiDBLite consensus disorder prediction 132 151 - -
Lele06g0427 517 MobiDBLite consensus disorder prediction 136 150 - -
Lele06g0427 517 CDD CID_RPRD_like 7 128 - -
Lele06g0427 517 MobiDBLite consensus disorder prediction 427 441 - -
Lele06g0427 517 Coils Coil 237 264 - -
Lele06g0427 517 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Lele06g0427 517 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 493 - -
Lele06g0427 517 Gene3D - 2 130 IPR008942 -
Lele06g0427 517 Pfam CID domain 9 120 IPR006569 -
Lele06g0427 517 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Lele06g0427 517 MobiDBLite consensus disorder prediction 409 426 - -
Lele06g0427 517 SUPERFAMILY ENTH/VHS domain 11 118 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0427 Lele-ChrLele06 2621666 2626288 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0427 06 2621666 2626288 Lele06g0427 06 2621666 2626288 ECH
Lele05g0611 05 3583923 3589056 Lele06g0427 06 2621666 2626288 ECH
Lele06g0427 06 2621666 2626288 Lele07g0639 07 3643006 3648045 hybridization
Lele06g0427 06 2621666 2626288 Lele08g0439 08 2683456 2684510 hybridization