Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0611 ATGGGTAGCACATTCAATCCACAGATATTGGTGGAAAAGTTAGCCAAGCTGAATAGTTCACAAGCGAGCATAGAGACTCTGTCTCATTGGTGCATTTTTCATATGAATAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTCCATTTTTCTCCTCGTGAACAAAGATTGGCATTTCTATATCTTGCCAATGATATATTGCAGAACAGCAGGCGAAAGGGTTCAGAATTTGTTGGTGAATTTTGGAGGGTTCTTCCAGATGCTCTTCGAGATGTGATTAAGAATGGAGATGAATTTGGAAGGAATGCTGCACTTCGACTGATTAGTATTTGGGAAGAGAGGAAAGTTTTTGGTTCTCGTGGTCAAATTCTTAAAGAAGAGTTTATTGGGAGGCATGTTGACAATAGTAGCCGTAATGGGAAATCCATGCCCTTGAAGCTGAGACCGTCTGCTGGGAATACCTTGGAGAAACTTGTTTCAGGTTATCAAGCTGTTTATGGAGGGCATGCAGATGAAGATGCTCTATTGAGTAAATGCAGGAATGCCATTAGCTGTCTTGAGAAAGTAGACAAGGAAAATGGTCAAGAAAGCACTTCTGGGAAGGTCCATGGATTAACACTAGAGGATGAGCTCCGGGGACAAGATACTGTATTGAGGGACTGCATCGAGCAATTAACAGCTATAGAATCATCAAGAGCAAGCCTTGTGTCTCATCTGAGAGAGGCTCTCCAGGATCAGGAATTGAAGCTGGATCAAGTCCGTAACCAAATCCAGGCTGCACGTGTTCAATCCGAACGAGTTGGTAATACCTGCCAGCGATTACTAAATGACAACAACATTCAATCGTTAGTTGCACAAAACTCAAAGGAAATTCAGACCTCCTTAACTCCTCCCAGCTTTATTCCTGTAGATAGGGAGCAGTCTGCTCCATTGATGTATACACAACAAGTATCTTTTCCCCAAAAATCTGGACACATTGAGGAAGATACACGTAAGTCTGCCGCTGCTGCGGTGGCAGCTAAGTTAACTGCATCAACATCATCTGCCCAGATGCTATCTTACGTTCTATCCTCCTTAGCATCTGAAGGGGTAATAGGCAATTCTTCTATTAAAGAGTCTTCTGGTGGTGATTATCATCCAGAGAAGAGGATCAAGCTGGATAATGACCAATCATCTTATATACCGTCTCATAATCCGCAACAACCGCTTCCTCCCTTTTCTCTCCCTGAATCTCTACACGATGCATCTACAATCAATAAGCAATCTACTCTCAGTGAACTCCCACCTCCACCTTCATCATCTCCTCCCCCGTTGCCCCCACCACCACCAGTGCCACAGTACCAAGTGCCACAGTTCATGCAGACTGCTGGATCAATTAACAATATAGCATATAGCTATAGCATGACACTACAGCCATCCATGGCAACCTACCCTACTGTTGGTGCTTCCCTGAATAGTATTTCACCTTATACACCAGCTCCAGTGGGCACATACGAGGGCTTTCAGGGTTCGGATGGTAACTACTATAAGCAGCCCTCATCAATGCCTATGGCTCCAATTTCTCGGCAATGA 1575 0.4381 MGSTFNPQILVEKLAKLNSSQASIETLSHWCIFHMNKAKQVVETWDRQFHFSPREQRLAFLYLANDILQNSRRKGSEFVGEFWRVLPDALRDVIKNGDEFGRNAALRLISIWEERKVFGSRGQILKEEFIGRHVDNSSRNGKSMPLKLRPSAGNTLEKLVSGYQAVYGGHADEDALLSKCRNAISCLEKVDKENGQESTSGKVHGLTLEDELRGQDTVLRDCIEQLTAIESSRASLVSHLREALQDQELKLDQVRNQIQAARVQSERVGNTCQRLLNDNNIQSLVAQNSKEIQTSLTPPSFIPVDREQSAPLMYTQQVSFPQKSGHIEEDTRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNSSIKESSGGDYHPEKRIKLDNDQSSYIPSHNPQQPLPPFSLPESLHDASTINKQSTLSELPPPPSSSPPPLPPPPPVPQYQVPQFMQTAGSINNIAYSYSMTLQPSMATYPTVGASLNSISPYTPAPVGTYEGFQGSDGNYYKQPSSMPMAPISRQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0611 524 MobiDBLite consensus disorder prediction 390 448 - -
Lele05g0611 524 Pfam CID domain 9 120 IPR006569 -
Lele05g0611 524 Gene3D - 2 129 IPR008942 -
Lele05g0611 524 MobiDBLite consensus disorder prediction 503 524 - -
Lele05g0611 524 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 504 - -
Lele05g0611 524 CDD CID_RPRD_like 7 128 - -
Lele05g0611 524 MobiDBLite consensus disorder prediction 413 428 - -
Lele05g0611 524 Coils Coil 237 264 - -
Lele05g0611 524 MobiDBLite consensus disorder prediction 505 524 - -
Lele05g0611 524 SMART 558neu5 9 130 IPR006569 -
Lele05g0611 524 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Lele05g0611 524 SUPERFAMILY ENTH/VHS domain 11 117 IPR008942 -
Lele05g0611 524 MobiDBLite consensus disorder prediction 429 448 - -
Lele05g0611 524 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0611 Lele-ChrLele05 3583923 3589056 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0611 05 3583923 3589056 Lele05g0611 05 3583923 3589056 ECH
Lele05g0611 05 3583923 3589056 Lele06g0427 06 2621666 2626288 ECH
Lele05g0611 05 3583923 3589056 Lele07g0639 07 3643006 3648045 hybridization
Lele05g0611 05 3583923 3589056 Lele08g0439 08 2683456 2684510 hybridization