Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0049 ATGATTATGGCTTTTCACTCTCTTTCACTCTCCTCGCAGCTACTCTTCATTTGTTCCTTTCCGCTTCTTGCCCTGGCTCAGTGCAACAAGGATTCCGTCATATTCGTGTTCGGGGATTCCAACTCCGACACGGGAGGACTTGCTTCCGGACTCGGTTTCCCCATCAATCTTCCTAATGGCCGCACTTTCTTCCACAGATCCACTGGTCGCTTGTCCGATGGACGCCTCATCATCGATTTTCTCTGCCAAAGTTTGAATGCAAGTCTTTTGACTCCATACCTGGACGCCTTGTCAGGATCCACGTTCTCAAATGGAGCAAACTTTGCAGTGGTCGGGTCCTCTACCCTTCCTGAATTTGTTCCTTTCGCTTTGAACATCCAGATCATGCAGTTCCTCCATTTCAAGGCTCGTACCCTCGAACTTGCAGCTTCTGGTGCAAGATATTATATCAACGATGCCGGGTTTCGAAATGCGCTCTACATGATTGATATTGGACAGAATGACATTGCCGATTCCTTTGCCAAGAACCTTTCATATGCCCAAGTCGTTAAGAGAATCCCAGCGGTAGTTGCGGAAATTGAGAGTGCTATTAAGATTTTGTACGAAGAAGGTGGCACGAAGTTCTGGGTTCACAACACTGGACCATTGGGCTGTCTTCCTAAATTAATCACATTGGCTCAAGCGAAGATTGTGGATTCACTTGGATGCCTTTCTAATTATAATAGTGCAGCTAGATTGTTCAATGAAGCGCTGCTTCATCTGCTTCAGAAGCTAAGAACTGAACTGAAAGATGCTACTCTAGTTCATGTGGATATTTATACCATCAAGCACGACCTCATCGCAAATGCCGCCAAATATGGTTTCTCAAATCCATTGATGGCGTGCTGTGGATTCGGAGGGCCTCCATATAATTTTGATAACAGAGTAACATGCGGTCAACCCGGTCATCAGGTTTGTGGGGAAGGATCTCGGTATGTGAATTGGGATGGAATTCATTTCACCGAGGCTGCAAATTCAATGGTGGCTTCTAAGATACTTTCCACGGTTTATTCCACACCACGCACGCCTTTCGATTTCTTCTGCCGCCATTGA 1092 0.4606 MIMAFHSLSLSSQLLFICSFPLLALAQCNKDSVIFVFGDSNSDTGGLASGLGFPINLPNGRTFFHRSTGRLSDGRLIIDFLCQSLNASLLTPYLDALSGSTFSNGANFAVVGSSTLPEFVPFALNIQIMQFLHFKARTLELAASGARYYINDAGFRNALYMIDIGQNDIADSFAKNLSYAQVVKRIPAVVAEIESAIKILYEEGGTKFWVHNTGPLGCLPKLITLAQAKIVDSLGCLSNYNSAARLFNEALLHLLQKLRTELKDATLVHVDIYTIKHDLIANAAKYGFSNPLMACCGFGGPPYNFDNRVTCGQPGHQVCGEGSRYVNWDGIHFTEAANSMVASKILSTVYSTPRTPFDFFCRH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0049 363 Gene3D SGNH hydrolase 24 352 IPR036514 -
Lele06g0049 363 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 347 - -
Lele06g0049 363 CDD SGNH_plant_lipase_like 34 347 IPR035669 -
Lele06g0049 363 Pfam GDSL-like Lipase/Acylhydrolase 34 345 IPR001087 GO:0016788
Lele06g0049 363 SUPERFAMILY SGNH hydrolase 34 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0049 Lele-ChrLele06 332052 336113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0049 34 345 Acyl Lipid Metabolism Gene Families AT4G10950 27.052 5.83e-29 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0232 05 1299584 1302566 Lele06g0049 06 332052 336113 ECH
Lele06g0049 06 332052 336113 Lele06g0049 06 332052 336113 ECH
Lele06g0049 06 332052 336113 Lele07g0241 07 1330119 1332666 hybridization
Lele06g0049 06 332052 336113 Lele08g0047 08 308512 311204 hybridization