Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0232 ATGAGGACGCGGCTGTTGAGTATGGCCTTTCACTCTCTTTCACTATCCTTGCAGCTACTCTTCTTTTGTTCCTTTCCGCTTCTTGCCCTGGCTCATTGCAATGAGCATGCCGCCATATTCGTGTTCGGCGATTCCAACTCCGACACGGGAGGACTCGCTTCCGGACTCGGTTTCCCCGTCAATCTTCCTAATGGCCGCACTTTCTTCCACAGATCCACTGGTCGCTTGTCCGATGGACGCCTCGTCATCGATTTTCTCTGCCAAAGCTTGAATGCAAGCCTTTTGACTCCATACCTGGACGCCTTGTCAGGATCCACGTTCTCAAATGGGGCAAACTTTGCAGTGGTTGGGTCCTCTACCCTTCCTGAATTTGTTCCTTTCGCTTTGAACATCCAGATCATGCAGTTCCTCCATTTCAGGGCTCGTACCCTCGAACTTGTAGCTTCTGGTGCAAGAAATCATATCAACGATGCCGGGTTTCGAAATGCACTCTACATGATTGATATTGGACAGAATGACATTGCCGATTCCTTTACCAAGAACCTTTCATATGCCCAAGTTGTTAAGAGAATCCCAGCGGTTGTTGCAGAAATTGAGAGTGCTATTAAGATTTTGTACAGAGAAGGTGCCAGGAAGTTCTGGGTTCACAACACTGGACCATTGGGCTGTCTTCCTAAACTAATCACACTGGCTCAAACGAAGGTTATGGATTCGCTTGGATGTCTTTCTAATTATAATAGTGCTGCAAGATTGTTCAATGAAGCGCTGCTTCACCTGCTTCAGAAGCTAATTACTGAACTGAAAGATGCTACTTTAGTTCATGTGGATATTTATACCATCAAGCACGACCTCATCGCAAATGCTGCCAAATACGGTTTCTCAAATCCATTGATGACGTGCTGTGGATTCGGAGGGCCTCCATATAATTTTGATAACAGAGTGACATGCGGTCAACCCGGTTATCAGGCCTGTGGGGAAGGATCTCGGTATGTGAATTGGGATGGAATTCATCTCACTGAGGCTGCAAATTCAATGGTGGCTTCTAAGATACTTTCCATGTCTTATTCCACGCCACGCACGCCTTTCGATTTCTTCTGCCGCCATTGA 1107 0.467 MRTRLLSMAFHSLSLSLQLLFFCSFPLLALAHCNEHAAIFVFGDSNSDTGGLASGLGFPVNLPNGRTFFHRSTGRLSDGRLVIDFLCQSLNASLLTPYLDALSGSTFSNGANFAVVGSSTLPEFVPFALNIQIMQFLHFRARTLELVASGARNHINDAGFRNALYMIDIGQNDIADSFTKNLSYAQVVKRIPAVVAEIESAIKILYREGARKFWVHNTGPLGCLPKLITLAQTKVMDSLGCLSNYNSAARLFNEALLHLLQKLITELKDATLVHVDIYTIKHDLIANAAKYGFSNPLMTCCGFGGPPYNFDNRVTCGQPGYQACGEGSRYVNWDGIHLTEAANSMVASKILSMSYSTPRTPFDFFCRH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0232 368 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 19 356 - -
Lele05g0232 368 Pfam GDSL-like Lipase/Acylhydrolase 39 350 IPR001087 GO:0016788
Lele05g0232 368 SUPERFAMILY SGNH hydrolase 39 352 - -
Lele05g0232 368 Gene3D SGNH hydrolase 29 355 IPR036514 -
Lele05g0232 368 CDD SGNH_plant_lipase_like 38 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0232 Lele-ChrLele05 1299584 1302566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0232 38 357 Acyl Lipid Metabolism Gene Families AT4G10950 27.273 4.59e-30 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0232 05 1299584 1302566 Lele06g0049 06 332052 336113 ECH
Lele05g0232 05 1299584 1302566 Lele05g0232 05 1299584 1302566 ECH
Lele05g0232 05 1299584 1302566 Lele07g0241 07 1330119 1332666 hybridization
Lele05g0232 05 1299584 1302566 Lele08g0047 08 308512 311204 hybridization