Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1369 ATGGGTTCTCTGCCTCCATTTTCAGATGCCTTTTCTCCCTCACCGTCCAAGCAATCCCTTCCTCTCATCGACGAAGCCGCCCTCCTCAGCCTCTTCAAATCTCAGCAGAACCACATCAACTTCTTCTTCAACAACATCGACCATGCCCAAACCCTCGCATTCACTCGCATCCTCCTCAATTCCTCTGGTACCATCTTCTTCACCGGCGTCGGCAAATCTGGATTCGTCGCTAACAAGATCTCGCAGACTCTTGTCTCCCTCGGCATCGCATCTGCATTCCTATCCCCCGTCGATGCTCTCCATGGTGACATCGGAATTCTCAGCGGTCGTGACGTTGTCGTCCTCCTCAGCAAATCTGGTAACACCGAGGAACTTGTTAGGCTTTTTCCTTGTGCCCGGGCCAAGGGGGCCTATCTGATATCGGTCACCTCCGTCCAAGGGAATGTGCTGGCGGGCATGTGCGATATGAACGTGCATTTGCCTTTGGAGAGGGAATTGTGTCCGTTTAATCTGGCGCCGGTGACTTCCACAGCCATCCAGATGGTTTTCGGGGATACGGTGGCGATTGCTCTTATGCAAGCCAGAAATTTGAGCCAGGAAGACTACGCCAGCAATCACCCCGCTGGGAGGATTGGCAAACACCTTATCTTCAAGCTTTGGCTTCTGGTAAAGGATGTCATGAAGAAGCAGGATGGGCTTCCTGTTTGCCGGGAAGCAGATCTTATTATGGATCAGCTGGTGGAATTGACGAGTAAAGGATGTGGATGTCTGCTTGTTGTAGACGAGAAACATCATCTGACTGGGACATTTACAGATGGTGATCTACGACGCACGCTCAAAGCTAGTGGGGAGGGCATTTTCAAGCTCACTGTGGGGGAAATGTGCAACAGGAAACCAAAAATCATTGGTCCAGACGATATGGCAGTGGAGGCCATGAAGAAGATGGAAGCACCTCCATCACGTGTACAATTTTTGCCTGTTATCAGTGATGAAAATGTCTTGATTGGGATTGTTACTTTGCACGGTTTGGTTTCAGCAGGGTTGTAA 1047 0.5033 MGSLPPFSDAFSPSPSKQSLPLIDEAALLSLFKSQQNHINFFFNNIDHAQTLAFTRILLNSSGTIFFTGVGKSGFVANKISQTLVSLGIASAFLSPVDALHGDIGILSGRDVVVLLSKSGNTEELVRLFPCARAKGAYLISVTSVQGNVLAGMCDMNVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMQARNLSQEDYASNHPAGRIGKHLIFKLWLLVKDVMKKQDGLPVCREADLIMDQLVELTSKGCGCLLVVDEKHHLTGTFTDGDLRRTLKASGEGIFKLTVGEMCNRKPKIIGPDDMAVEAMKKMEAPPSRVQFLPVISDENVLIGIVTLHGLVSAGL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1369 348 Gene3D - 26 217 - -
Lele05g1369 348 Pfam SIS domain 59 189 IPR001347 GO:0097367|GO:1901135
Lele05g1369 348 ProSiteProfiles SIS domain profile. 54 197 IPR001347 GO:0097367|GO:1901135
Lele05g1369 348 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 63 338 IPR004800 GO:0005975|GO:0016853
Lele05g1369 348 SUPERFAMILY SIS domain 31 347 IPR046348 GO:0097367|GO:1901135
Lele05g1369 348 CDD CBS_pair_SIS_assoc 221 344 - -
Lele05g1369 348 PIRSF KdsD_KpsF 14 348 IPR004800 GO:0005975|GO:0016853
Lele05g1369 348 Pfam CBS domain 223 280 IPR000644 -
Lele05g1369 348 Pfam CBS domain 291 346 IPR000644 -
Lele05g1369 348 PANTHER - 1 348 - -
Lele05g1369 348 CDD SIS_Kpsf 63 190 IPR035474 -
Lele05g1369 348 Gene3D - 218 346 IPR046342 -
Lele05g1369 348 ProSiteProfiles CBS domain profile. 295 348 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1369 Lele-ChrLele05 8611998 8613903 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1369 05 8611998 8613903 Lele05g1369 05 8611998 8613903 ECH
Lele05g1369 05 8611998 8613903 Lele07g1431 07 8677744 8679655 hybridization
Lele05g1369 05 8611998 8613903 Lele08g1226 08 7748842 7750752 hybridization