Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0735 ATGGAGTCGAGCATTCTGGAATCTATCGGCGTAGAGATTATCGGAGTGATGTCTCCCGTCTCCATCTGTATGTTCCTTGTTGTCCTCCTCGTCTATTCCCTCTCTTCCTCCAATCCCTTTTCTCCTGCTTCTGTCGATACCATTCGCACCGCTGCCAACCTCGTCTATGTCGAGAACTCTTCCGACTCTGCTTCCCAGAAGCTGGAAGGTGCTCTTCTTAATGCTCTAGTCTTCGTCATCTTAATCGCCACCGTCACTTTCCTCCTTGTCCTTCTTTACTATTACAACTTCACCAATTTCCTCAAGAACTACATGCGCTTCTCCGCCTTCTTCGTTCTTGCCACCATGGGCGGATCCATCTTCTTGTCCGTCATTCAGAAGTTCTCTATTCCTGTTGATTCCGTTACTTGTTTTCTTCTGCTTTTCAATTTCACTGTTGTCGGCGTTCTCTCCGTGTTTTCGAGTGGGATCCCAATTTTGATGAGGCAAACCTACATGGTTTGTTTGGGGATTATTGTGGCGGCCTGGTTCACGAAATTGCCTGAGTGGACTACTTGGGTTTTGTTAGTCGCATTGGCCGTGTATGATTTGGTGGCTGTTTTGGCACCCGGTGGCCCGCTTAAGCTGTTGGTGGATTTAGCCTCAACTAGGGATGAAGAGCTCCCTGCCTTGGTGTACGAGGCTCGACCCACGGTTGCTCGAACTGGGAATCACGGAGCCTCGGCTTTAGGGCTTTTGGTCGCTGGAGTTTCAGATTCTTCGTCAATCGAGCTTCAAGCGGCGTCAAGGGACAACGTCAATAGAAATGAGAATGAGGGTCACAGTAATGCCGACTATTCTGCAGTGACCTTGGGGGATTTTCAGAATGAGGAGGCTCATAGTGACAGAGATGACGGGGAGAGATCGCCACTGGTGGGTAATGCACGAGAAAGGCATTCATTAAGTAGTGATCCTACCCTTGTAGAAATAATGGGAATGGGGAATGAAGGAAGGCAAACGAGGGGTGGTGATGTGGAGATTACTGATAGGGGTATTAAACTTGGTCTTGGCGACTTTGTTTTCTACAGTGTCCTTGTGGGTAGAGCTGCAATGTATGACCTTATGACAGTGTATGCTTGTTACCTTGCAATTATATCAGGACTAGGTTGCACTCTAATTTTGTTGTCAGTGTGCCGTCGAGCTCTGCCTGCACTTCCTATTTCTATCACACTGGGTGTTATTTTTTATTTCTTGACACGATTATTAATGGAGCCCTTCATTGTTGGGGCAGCCACAAATCTAATGATGTTTTGA 1293 0.4733 MESSILESIGVEIIGVMSPVSICMFLVVLLVYSLSSSNPFSPASVDTIRTAANLVYVENSSDSASQKLEGALLNALVFVILIATVTFLLVLLYYYNFTNFLKNYMRFSAFFVLATMGGSIFLSVIQKFSIPVDSVTCFLLLFNFTVVGVLSVFSSGIPILMRQTYMVCLGIIVAAWFTKLPEWTTWVLLVALAVYDLVAVLAPGGPLKLLVDLASTRDEELPALVYEARPTVARTGNHGASALGLLVAGVSDSSSIELQAASRDNVNRNENEGHSNADYSAVTLGDFQNEEAHSDRDDGERSPLVGNARERHSLSSDPTLVEIMGMGNEGRQTRGGDVEITDRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRRALPALPISITLGVIFYFLTRLLMEPFIVGAATNLMMF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0735 430 Gene3D Presenilin 327 421 IPR042524 -
Lele05g0735 430 PANTHER PRESENILIN 2 430 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele05g0735 430 SMART psh_8 69 416 IPR006639 GO:0004190|GO:0016020
Lele05g0735 430 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele05g0735 430 PRINTS Presenilin family signature 196 213 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele05g0735 430 PRINTS Presenilin family signature 179 186 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele05g0735 430 MobiDBLite consensus disorder prediction 290 307 - -
Lele05g0735 430 Pfam Presenilin 10 420 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele05g0735 430 FunFam Presenilin 326 421 - -
Lele05g0735 430 MobiDBLite consensus disorder prediction 290 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0735 Lele-ChrLele05 4315042 4316334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0735 1 430 Miscellaneous Gene Families AT1G08700 66.087 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0735 05 4315042 4316334 Lele05g0735 05 4315042 4316334 ECH
Lele05g0735 05 4315042 4316334 Lele07g0770 07 4387135 4388427 hybridization
Lele05g0735 05 4315042 4316334 Lele08g0576 08 3475894 3477258 hybridization