Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0677 ATGGCTCCGGCATCGCAAGGAAGGGATTCGGACAATACTGAATTTAACCAGGAAATTCAAACTAGATCGCTTCAAGAACGAGTTGCGATCGTTACTGAGTCGTCGTCAATTACACCTCCAACTCCGCCCCTGCAGAAATCAGTCGTCGCTCAGATTAATTCCTTTTCCCCTGGTGGCAGTAATCCGCGAGCCATCGTCATCAGGGCTGATGTTTCCGACCCGACTCTGGTGAAGTCTCTCTTCGATGAGGCTGAGAAGGCGTTCTACTCACCGGTTCATATCCTGGTTAATTCGGCTGCAGTTACCGACAGCAAATACCCTTCCGTAGCCAACACTTCCCTGGATGACTTCGATCATATTTTCAGGGCAAGAGGGGCGTTCCTATGCTGTAAGGAGGCGGCAAACCGCTTGAAACGTGGCGGAGGAGGTCGAATTATAATGTTATCTACATCATTGGCGGCTTCATTGATGTTAGGTTATGGAGCATACGCAGCATCCAAAGCAGCCGTAGAGACAATGGTGAAGATCTTAGCAAAAGAGCTGAAGGGGAGTGGAATCACGACCAATTGCATTGCGCCGTGGGCAGTTGCCACAGACATGTTTTTTTCCGGTAAGAGTGAAGGACAAGTGAAGGCGGGTATTGAAATGTGTCCTCTAGGTAGGCTTGGGGAGACCAAGGATATAGCCCCTGTGGTGGGGTTCTTGGCCGGTGACGCCGGGGAGTGGATCAATGGTCAGGCTAGAAAGTTGCTTCGTTTCTCTCACATGCATATCTGTTTGGAGTTGGTCAGTTGGTTTTTGGACTTGCTAGGAGTTCAAACATCTAATTTTATAATCAATTTTATATGCATGCAAAATGAGTTTTGGACGTGCATTTGTGCAAAGGTGAAGACAGAGTCTGGAAAAGTGAGAAGGAAAGGTACAAATTTGTCAATTGCAAGGCGAAGGAGAGGAAAGGGGATGGCACAATTTACAACTCACGGTCGCTTAAAGACGCTCTTTAATGGCGAGGGATTCTCATTTCCTTCGGAGCAGAAGGACCCCTTTCCCTTCAAGTTCAGATCAATTAGGAGCTGCGAGCTAAAGGTTAGGTGTATAGGTTCTTTTTCATCATACCCGAGTAGGAAAAGGAATCGTTGCAATGCGGAGGCACTCCCCAGTCCCACTTTTAGCAATGGCAGTGTTCATTATGAGGATTATCCTGATCATGATGATTATGAGTTTGAGAACGATAGCTTAGCTTCTTTCAGAGGCCTGGTGTTGGATGTATCGTACAGGCCAGTCAATGTTGTAGGCTGGAAACGTGCTATATGTTTGGAGTTTATGGAGAAGGCTGATGTACTTGAGTATTATGATCAGACTGTGAACTCGCCAAGTGGATCTTTCTATATACCAGCTGTCTTAAGGGTTCCTAATCTACTTCAGGTTGTCAAAAGAAGAGTTGTCAAGAGCAATCTTAATAGGAAGAATATACTATATCGGGACTTCTACACTTGTCAGTATTGCTCTTCACGTGAGAATTTGACCATTGACCATGTTGTGCCCGCTTCACTGGGTGGAGAATGGAAATGGGAAAATCTAGTTACTGCTTGTACCAAATGTAACTCAAGGAAAGGTCACAAAACTTTAGAGGAAGCAAAAGTGAAGCTGATCAGGACTCCCAAGGCACCTAAGGACTATGACATACATGCCATACCCCTAACCAGTGCGGCACTAAGGAGGTTGACGGTAAGAAAGGGAACACCTGAAGAATGGCTTCAGTATCTATCAAGGTGGCCTGCATCTAATTTGAGGACAGTTTGGGTTGCTACCCGCTGGTACATGCAGCAGTTAAGCATATCTGCCTCATGA 1851 0.4608 MAPASQGRDSDNTEFNQEIQTRSLQERVAIVTESSSITPPTPPLQKSVVAQINSFSPGGSNPRAIVIRADVSDPTLVKSLFDEAEKAFYSPVHILVNSAAVTDSKYPSVANTSLDDFDHIFRARGAFLCCKEAANRLKRGGGGRIIMLSTSLAASLMLGYGAYAASKAAVETMVKILAKELKGSGITTNCIAPWAVATDMFFSGKSEGQVKAGIEMCPLGRLGETKDIAPVVGFLAGDAGEWINGQARKLLRFSHMHICLELVSWFLDLLGVQTSNFIINFICMQNEFWTCICAKVKTESGKVRRKGTNLSIARRRRGKGMAQFTTHGRLKTLFNGEGFSFPSEQKDPFPFKFRSIRSCELKVRCIGSFSSYPSRKRNRCNAEALPSPTFSNGSVHYEDYPDHDDYEFENDSLASFRGLVLDVSYRPVNVVGWKRAICLEFMEKADVLEYYDQTVNSPSGSFYIPAVLRVPNLLQVVKRRVVKSNLNRKNILYRDFYTCQYCSSRENLTIDHVVPASLGGEWKWENLVTACTKCNSRKGHKTLEEAKVKLIRTPKAPKDYDIHAIPLTSAALRRLTVRKGTPEEWLQYLSRWPASNLRTVWVATRWYMQQLSISAS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0677 616 Pfam Enoyl-(Acyl carrier protein) reductase 64 247 - -
Lele05g0677 616 Pfam HNH endonuclease 499 546 IPR029471 -
Lele05g0677 616 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Lele05g0677 616 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Lele05g0677 616 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Lele05g0677 616 Gene3D - 13 255 - -
Lele05g0677 616 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Lele05g0677 616 PRINTS Glucose/ribitol dehydrogenase family signature 184 201 IPR002347 -
Lele05g0677 616 PRINTS Glucose/ribitol dehydrogenase family signature 218 238 IPR002347 -
Lele05g0677 616 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Lele05g0677 616 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Lele05g0677 616 Gene3D - 475 562 - -
Lele05g0677 616 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 247 IPR036291 -
Lele05g0677 616 PANTHER SLL1193 PROTEIN 411 590 - -
Lele05g0677 616 SMART HNH_5 486 536 IPR003615 -
Lele05g0677 616 CDD HNHc 488 539 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0677 Lele-ChrLele05 3994683 4001803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0677 70 246 Miscellaneous Gene Families AT2G29290 31.492 1.51e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0677 05 3994683 4001803 Lele05g0677 05 3994683 4001803 ECH
Lele05g0677 05 3994683 4001803 Lele08g0510 08 3103849 3110940 hybridization