Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1575 ATGGGCAGAGACAGAGAAGAGGCTCTCACATTCATCACCAACCCATCATCTTCTTCTTCTCCAATCACCGTCTCTGACCAGCTCGACTGCTCCCTCACCGACCCCACTTCCTGCATCGGAAGCGCCTCCGGAAGTTTCCAGAGCGACAGTCTTCTTGGGGCCGGCGAACCCGGCAGCACCAACCTTCACCTAGAGTTCGGCTTTTTCCGACCAGATTTCCGGCAGAGCCCGCTTGCCGGGACGGTCGAGTTATATCAACGGCATGTCTTTCTTTGTTACAAGAACCCGCGGTTTTGGCCTCCAAGAATTGAGGCTTCCGAGTTTGATCGCTTGCCTAGGCTTCTTTATGCCGCCGTCATGGCCAGGAAGAGCGATATGAAGAAGGAGACCCATTTAACAATATGCGAGGGACATGATGGGACTGAAACATCAAATGGAGATGTATTAATCTTTCCAGACATGATCAGATACAGGAGATTGACTCATTTTGATGTTGAAACATTTGTTGAAGAAGTGCTTGTAAAGGATGGAGAATGGCGTCCTGGAACTCCTGAAGCCTTAAGAGGTTCACACATTTTTGTGTGTTCACATGGATCCCGTGATCGTAGATGCGGTGTTTGTGGACCTGTGTTGGTAAATAAATTCAGGGAAGAGATTGAGTTACATGGACTTCAAGGTAAAGTGTTTGTTAGCCCATGCTCACACATTGGGGGGCATAAGTACGCAGGAAATGTCATTATATTCGGATCAAGCATCAATGGAGAAGTCATGGGGCACTGGTATGGGTATGTTACTCCCGATGATGTGCTTGTTTTGCTTCAACAACATATTATAAAAGGGGAGATTTGGGACTCACTGTGGAGGGGTCAGATGGGTATACCAGAAGATGTGCAGAAGAAAACCCAAGAACAGAGGCTTCAGCTGAAGGGCACAAGAAATGTAGAAGAAAGCCACAAAACTTCAATTCTGTCACAAAATTCTAAGACAAGCACCGCTCTTTGTAGATCTCAAGACAGCTCTGTGAGCTGTTGCCAGCAAAATGAGAACTCCTCCTGCTGCCGTGACGATGACTTTGGGGACAAGACTAGTAATTCTGATGCCTTGGAGACAGAAGCAAAACTTTCAGCTGACAACAATTGCAGCGGCAGCGGCATCAAGAGACTGGTTTCTCAGATAAATAGCGGCAAAGGAGCGTCACGGCGAAAACTCTTTTCCATGCCAATGTGGCTTGATGGCTGGGAGCCGGAAGATACCTATGCTACTCTTGCTGTTGTCTGTGCTGCCGTGTCTGTAGCAATTGCCTACAGCTGCTACAAACAGCTGAAATAG 1329 0.4771 MGRDREEALTFITNPSSSSSPITVSDQLDCSLTDPTSCIGSASGSFQSDSLLGAGEPGSTNLHLEFGFFRPDFRQSPLAGTVELYQRHVFLCYKNPRFWPPRIEASEFDRLPRLLYAAVMARKSDMKKETHLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKDGEWRPGTPEALRGSHIFVCSHGSRDRRCGVCGPVLVNKFREEIELHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSINGEVMGHWYGYVTPDDVLVLLQQHIIKGEIWDSLWRGQMGIPEDVQKKTQEQRLQLKGTRNVEESHKTSILSQNSKTSTALCRSQDSSVSCCQQNENSSCCRDDDFGDKTSNSDALETEAKLSADNNCSGSGIKRLVSQINSGKGASRRKLFSMPMWLDGWEPEDTYATLAVVCAAVSVAIAYSCYKQLK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1575 442 Gene3D Glutaredoxin 189 290 - -
Lele04g1575 442 FunFam APD1p protein 189 288 - -
Lele04g1575 442 CDD TRX_Fd_Sucrase 189 291 IPR009737 -
Lele04g1575 442 Pfam Sucrase/ferredoxin-like 78 289 IPR009737 -
Lele04g1575 442 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 38 429 IPR009737 -
Lele04g1575 442 SUPERFAMILY Thioredoxin-like 191 293 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1575 Lele-ChrLele04 20610888 20614085 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1575 04 20610888 20614085 Lele04g1575 04 20610888 20614085 ECH
Lele01g1313 01 8016066 8017253 Lele04g1575 04 20610888 20614085 hybridization
Lele02g1585 02 19761938 19764911 Lele04g1575 04 20610888 20614085 hybridization