Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1313 ATGATCGGATACAGGAGATTGACTCATTTTGATGTTGAAACATTTGTCGAAGAAGTGCTTGTAAAGGATGGAGAATGGCTTCCTGGAACTCCTGAAGCCTTAAGAGGTTCACACATTTTTGTGTGTTCACATGGATCCCATGATCGTAGATGTGGTGTTTGCGGACCTGTCTTGGTAAATAAATTCAGGGAAGAGATTGAGTTTCATGGTCTTCAGGGTAAAGTGTTTGTTAGCCCATGCTCACACATTGGGGGGCACAAGTACGCAGGAAATGTCATTATATTTGGATCAAGCATCAATGGAGAAGTCATGGGGCACTGGTATGGGTATGTTACTCCCAATGATGTGCCTGTTTTGCTTCAACAGCATATTATAAAAGGGGAGATTTGGGACTCGCTGTGGAGGGGTCAGATGGGTATACCAGAAGATGTGCAGAAGAAAAACCAAGAACAGAGGATTCGGCAGAAGGGCACAAGAAATGTAGAAGAAAGCCACAAAGCGTTTTGTAGATCTCAAGACAGCTCTGTGGGCTGCTGCCAGCAAAACGAGAACTCCTGCTGCTGCTGGGACGATGAGTTTGAGAAAAATATTAGTAATTCTGATGCCTTGGAGACAGAAGCAAAACTTTCAGCTGACAATAATAGCAGCGGCAGCAGCGTCAAGAGACTGGTTTCTCGGATAAATAGCGGCAAAGGAGCATCACGGCGAAAACTCTTTTCCACGCCAATGTGGCTTGATGGCTGGGAGCCAGAAGATACCTATGCTGCTCTTGCTGTTGTCTGTGCCGCTGTGTCTGTAGCAATTGCCTATAGCTGCTATAAACAGCTGAAATAG 834 0.4532 MIGYRRLTHFDVETFVEEVLVKDGEWLPGTPEALRGSHIFVCSHGSHDRRCGVCGPVLVNKFREEIEFHGLQGKVFVSPCSHIGGHKYAGNVIIFGSSINGEVMGHWYGYVTPNDVPVLLQQHIIKGEIWDSLWRGQMGIPEDVQKKNQEQRIRQKGTRNVEESHKAFCRSQDSSVGCCQQNENSCCCWDDEFEKNISNSDALETEAKLSADNNSSGSSVKRLVSRINSGKGASRRKLFSTPMWLDGWEPEDTYAALAVVCAAVSVAIAYSCYKQLK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1313 277 Gene3D Glutaredoxin 36 137 - -
Lele01g1313 277 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 1 264 IPR009737 -
Lele01g1313 277 Pfam Sucrase/ferredoxin-like 6 136 IPR009737 -
Lele01g1313 277 SUPERFAMILY Thioredoxin-like 38 140 IPR036249 -
Lele01g1313 277 CDD TRX_Fd_Sucrase 36 138 IPR009737 -
Lele01g1313 277 FunFam APD1p protein 36 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1313 Lele-ChrLele01 8016066 8017253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1313 01 8016066 8017253 Lele01g1313 01 8016066 8017253 ECH
Lele01g1313 01 8016066 8017253 Lele03g1327 03 8005158 8005996 hybridization
Lele01g1313 01 8016066 8017253 Lele04g1575 04 20610888 20614085 hybridization