Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0882 ATGTCGACATGGGCATCATACCATAACGCGGGTCCAATCTTCGGCGTCCCCAACTATTCCCGCACAGAAATCAGTTGCCTCAATATCTTCGGCTCCGGCTCTCCTATCGTCGCCGTCGTTAGATCTCCCCATCGCCGGCGTCTTCTGTGTGCATCACCGAGATTGCTGGAAGCTTGGAAGTTTGGAATTACAGAGGAGCAAATTGGCAATTTCAGAAACGTTGTGTGGATTGCAGTCAACTTGAGGAAAATGGACTTACGAGAAGCAATCAGTAATCAAACAGATGTCTCACTGAGCTTTGCTAAGCATCTATTGTTGAAGGGAGGTGAGAACAATAACTCGGTACTTTCACCCTTGTCCATCCATGTGGTGCTTAGCCTCATTGCTGCTGGCTCCAAGGGTTCCACACGTGATCAACTTCTCTCGTTCCTCAAGTCTAACTCTACCGATCATCTCAACTCCTTGGCCTCTCAGCTCGTCGCTGTTGTCCTCACTGATGGTAGTCTCAGTGGTGGCCCGCACTTGTGTTTCGCTAATGGTCTCTGGCTTGATCAATCTCTTTCTCTCAAGCCTTCTTTCAAGCAGATTGTCAACTCTGATTATAAAGCTGCTTTATCTCAAGTGGACTTCCAAACCAAGGCTGTTCAAGTGACCCAAGAAATTAATTCTTGGGCAGAAAAGGAGACGAGTGGCCTTATTAGAGAGGTTCTTCCTGCGGGATCCCTTGACAACTCAGCCAGACTCGTTTTTGCCAATGCATTATACTTTAAAGGGGCATGGAATGAGAAGTTCGATGCATCAGCAACCAAAGAATATGACTTTCACCTTGGAAGCGGGAGCTCAGTGAAAGCTCCCTTCATGACCAGCAAGGAAAAACAGTTTATTAGAGCATGTGACGGATTCAAAGTCCTTGGTCTTCCTTATAAGCAAGGTGAAGATAAACGCCGTTTCACCATGTATTTCCTTCTTCCAGATACAAATGATGGGCTGCCAGCTTTGGTTGAGAGGGTGGGTTCACAATCCGGGTTCTTGGATCGCCATCTTCCTCAAACCCGAGTGGAAGTAGGTGACTTTAGGATCCCAAAATTTAAGATTTCTTATGGAGTTGAAATATCCAATGTGCTTAAGGAATTGGGGGTAACATTGCCATTCTCTGGGGGAGAATTGACGGAAATAGTGGATTCTGTAGCTGGTCAAAATCTGTATGTTTCCAACATATTCCATAAGGCATTTATTGAAGTCAATGAAGAAGGAACTGAAGCTGCTGCCGCTAGTGCTGCTGTTATAAAACTGAGGTCATTGGCTTTGTCATCTAAGATAGACTTTGTAGCAGACCACCCTTTCCTCTTTATCGTTAGAGAAGATATGACTGGAACGCTGCTGTTTGTTGGGAAGGTGCTCCATCCTCTTGCTGGCTGA 1419 0.4581 MSTWASYHNAGPIFGVPNYSRTEISCLNIFGSGSPIVAVVRSPHRRRLLCASPRLLEAWKFGITEEQIGNFRNVVWIAVNLRKMDLREAISNQTDVSLSFAKHLLLKGGENNNSVLSPLSIHVVLSLIAAGSKGSTRDQLLSFLKSNSTDHLNSLASQLVAVVLTDGSLSGGPHLCFANGLWLDQSLSLKPSFKQIVNSDYKAALSQVDFQTKAVQVTQEINSWAEKETSGLIREVLPAGSLDNSARLVFANALYFKGAWNEKFDASATKEYDFHLGSGSSVKAPFMTSKEKQFIRACDGFKVLGLPYKQGEDKRRFTMYFLLPDTNDGLPALVERVGSQSGFLDRHLPQTRVEVGDFRIPKFKISYGVEISNVLKELGVTLPFSGGELTEIVDSVAGQNLYVSNIFHKAFIEVNEEGTEAAAASAAVIKLRSLALSSKIDFVADHPFLFIVREDMTGTLLFVGKVLHPLAG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0882 472 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 91 469 IPR000215 GO:0004867|GO:0005615
Lele04g0882 472 ProSitePatterns Serpins signature. 442 452 IPR023795 -
Lele04g0882 472 Pfam Serpin (serine protease inhibitor) 92 469 IPR023796 -
Lele04g0882 472 Gene3D - 260 464 IPR042185 -
Lele04g0882 472 CDD serpinP_plants 91 469 - -
Lele04g0882 472 Gene3D Antithrombin, subunit I, domain 2 111 416 IPR042178 -
Lele04g0882 472 SUPERFAMILY Serpins 69 469 IPR036186 -
Lele04g0882 472 FunFam Predicted protein 111 290 - -
Lele04g0882 472 SMART serpin2 98 469 IPR023796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0882 Lele-ChrLele04 5418355 5420986 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0882 04 5418355 5420986 Lele04g0882 04 5418355 5420986 ECH
Lele01g0882 01 5113335 5116610 Lele04g0882 04 5418355 5420986 hybridization
Lele02g0869 02 5274894 5277781 Lele04g0882 04 5418355 5420986 hybridization