Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0882 ATGCCCTCCTGGCCCGCCTACCCAAACGCGGATCCGTCTTTGGCGTTCCCAACACTTCCGAACAGAAATCCGTTGCTCCAATACCTTCGGTCTCCAGCTCTCCAATCGTCGCAGGCGTTAGATCTCCCCATCGCCGGCGTCTTCTGTGTGCATACTGAGTCTTTCTCGTGTACTATTGTGAGGCCCCAACTGCCAGTCACTTACATCGGTCGACAGGTGGTCATGGAGCAAATTGGCAAGTTCAGAACCATTTTGTGGATTGCAATCAACTTGAGGAAAATGGACCTGCGAGAAGCAATTAGTAATCAAACAGATGTCTCGTTGAGCTTTGCTAAGCATCTATTGTTGAAGGGAGATGAGAACAATAACCTGGTACTTTCACCCTTGTCCATCCACGTGGTGCTTAGCCTCATTACTACTGGCTCCAAGGGTTCCACTCGTGATCAGCTCCTCTCATTCCTCAAGTCTAAATCCACTGATCATCTGAACTCCCTTGCCCCTCAGCTCATTGCCGTTGTCTTCGCTGACGGTAGTCTCAGTGGTGGCCCCAGCTTGTGTTTCGCTAATGGTCTCTGGCTTGATCAATCTCTTTCTCTCAAGCCTTCTTTCAAACAGATTGTGGACTCTGATTATAAAGCTGCTTTATCTCAAGTGGACTTCCAAACCAAGGCCGTTCAAGTTACCCAAGAAATTAATTCTTGGGCAGAAAAGGAGACGAGTGGCCTTATTAGAGAGGTTCTTCCTGCGGGATCTCTTGACAACTCAGCCAGACTCGTTTTTGCTAATGCATTGTACTTTAAAGGAGCATGGAATGAGAAGTTTGATGCATCAGCAACCAAAGAATATGACTTTCACCTTGGAAGCGGGAGCTCAGTGAAGGCTCCCTTCATGACCTGCAAGAAAAAACAGTTTATTAGAGCATGTGATGGATTTAAAGTCCTGGGTCTTCCTTACAAGCAAGGTGAAGATAAACGCCGTTTCACCATGTATTTCCTTCTTCCAGATGCAAATGATGGGCTGCCAGCTTTGGTTGAGAGGGTGGGTTCACAATCCGGGTTCTTGGATCGCCATCTTCCTCAAACCCAAGTGGAAGTAGGTGACTTTAGGATCCCAAAATTTAAGATTTCTTATGGGGTTGAAATATCCGATGTGCTTAAGGAATTGGGGGTAACACTGCCATTCTCTGGGGGAGAATTGACGGAAATGGTGGATTCTGTGGCTGGTCAAAATCTACTTGTTTCCAACATATTCCATAAGTCATTCATTGAAGTCAATGAAGAAGGAACTGAAGCTGCTGCTGCTAGTGCGGCTGTTATAATACTGAGGTCTTTGCCTTTTCCATCTAGGGTAGACTTTGTAGCAGACCACCCTTTCCTCTTTATCGTCAGAGAAGACATGACTGGAACGCTGCTGTTCGTTGGAAAGGTGCTCAATCCTCTTGCTGGTTGA 1449 0.4658 MPSWPAYPNADPSLAFPTLPNRNPLLQYLRSPALQSSQALDLPIAGVFCVHTESFSCTIVRPQLPVTYIGRQVVMEQIGKFRTILWIAINLRKMDLREAISNQTDVSLSFAKHLLLKGDENNNLVLSPLSIHVVLSLITTGSKGSTRDQLLSFLKSKSTDHLNSLAPQLIAVVFADGSLSGGPSLCFANGLWLDQSLSLKPSFKQIVDSDYKAALSQVDFQTKAVQVTQEINSWAEKETSGLIREVLPAGSLDNSARLVFANALYFKGAWNEKFDASATKEYDFHLGSGSSVKAPFMTCKKKQFIRACDGFKVLGLPYKQGEDKRRFTMYFLLPDANDGLPALVERVGSQSGFLDRHLPQTQVEVGDFRIPKFKISYGVEISDVLKELGVTLPFSGGELTEMVDSVAGQNLLVSNIFHKSFIEVNEEGTEAAAASAAVIILRSLPFPSRVDFVADHPFLFIVREDMTGTLLFVGKVLNPLAG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0882 482 Gene3D Antithrombin, subunit I, domain 2 121 426 IPR042178 -
Lele01g0882 482 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 101 479 IPR000215 GO:0004867|GO:0005615
Lele01g0882 482 Gene3D - 270 474 IPR042185 -
Lele01g0882 482 SMART serpin2 108 479 IPR023796 -
Lele01g0882 482 Pfam Serpin (serine protease inhibitor) 102 479 IPR023796 -
Lele01g0882 482 CDD serpinP_plants 101 479 - -
Lele01g0882 482 FunFam Predicted protein 121 296 - -
Lele01g0882 482 SUPERFAMILY Serpins 75 479 IPR036186 -
Lele01g0882 482 ProSitePatterns Serpins signature. 452 462 IPR023795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0882 Lele-ChrLele01 5113335 5116610 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0882 01 5113335 5116610 Lele01g0882 01 5113335 5116610 ECH
Lele01g0882 01 5113335 5116610 Lele03g0881 03 5135491 5137575 hybridization
Lele01g0882 01 5113335 5116610 Lele04g0882 04 5418355 5420986 hybridization