Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0653 ATGCTGCGACAGAGTCCTCCCAAGCACAGGCACGATGGGACTTCGCCACTGCCTCTCGGGATGGACTGGAGTCCTCCACCACGAAATTGGAATGGACGGGATACAGTATGGCCGCACAGTCATCGTACAGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGTCTTTCTTCCAAAAACAAGAAATTCAGATCCCATCGTGTTTTACAGGGTTCAAGTTGGTCTACAATCACCAGAAGGTATCACAACACTACATGGAGTACTGAGAAGGTTCAATGATTTTTTAAAGTTGTTTGCAGATCTTAAAAGGGAGTTTCCCAGGAAAAGCATTCCTTCAGCTCCACCCAAAGGACTCGTACGATTGAAAAGCCGAGCATTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTTTTGTCAGACATTGATGTATCTAGATGTGCTGCGGTGGCATCCTTTCTTGAATTAGAGGCTGCAGCTAGAGCTTCTTTTCAAGATTCAAATCAGCAGAATTCAGAATCAGATCCTGCTGCCAATAACACAGCTTTTTCTGTGCAATCACCTCTCCATTCAAACTTAGCATTAGGTGCTGGCAGTTCATCTATCGCATCAGATTATGGTAGTGATACTGCATATGAGCCATCTGAACTTGGAACACCAAGAGTTGGGCTGGATGATCAATCTGAAGTTGGCACAGACGATTTAACATTAGATGAAGATGTGACAAGTCCGATGGAAAAGCTTGTCAAGTATGGTATATCAAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTTTAGAGCAGCTGGAAGGCCTTCCTAAGCATAAGGTAAATGCCAGACATTTCAGCTACGCTGCAGTGAACAAAAATAATGGAAATGCTTCACACTTGGCTAAAGACCCGATGGAGCTTTTCTCTGAACCTGAGCATTCTAAGTTTATTGGCCATGTTCGCAAGCTTTCAAATGAGAGCGTGGGAAGTGATGGAAGCTCTTTGAGAGGTAATGACTTTTCTGCCACTGGAATTCCAAATGGTTCTGTTGACCTTCCTGGAAATACCGCGGTATCCAGAACACCAGATATAGGTCATGCGGAGATGCAGTCTGCTGGTGATACTCAAGTAGTCCTTCCACTTGATCAGCGCCATAAATTAAATAGGATTCTTTTAACCATGCAGCGAAGGCTAGTTACTGCAAAAACTGATATGGAGGATCTTATAGTTAGATTAAATCAAGAAATAGCTGCCAAGGATTTTCTTGCAACCAAGGTCAAGGATTTGGAAGTAGAACTTGATACTACTAAACAGAAGAGTAAAGAAAACTTGCAACAGGCTATTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAGCTTCGTCAAAAGTCATTGGAAATGGAGATGAAACTAAAGTCTGAAGTGGGTGAAAATTCATGTCAGAATTCAACCAATGAATCGGTTGTTCAGGAGAAAGAAGAACTGTTTCAGACTTTGAATGCTACTAAAGAGCAGCTGGAAATTTTGTCAAAACAGTATAATGAGCTAGAAGCGAAATCTAAAGCTGATGTTAAGGTCCTGGTTAAAGAGGTCAAATCTCTCCGAAATTCCCAATCAGAATTGAAGAGGGAGCTTAGTGAGTCAATAAAGGAAAAGTGTGAAGCTGAGAAACTTCTTCAACATGAAAGAGAGAAGAGGGAACATGCTGAATCTGCTTCAAGAAATCTGATGCAGAAATGCAAGCTTCTGTTCAACCAGCTTCAGCAGTGCAACATCACTTTTCCTACAGAAGATCAAGATAACACAACAACAAACTCGTCATCTTTAGAAGAGACTGCAAACCAGTTAGCATTATCTGATGATCGAATTGGCGTCCTACTAGCAGAGGTAGAAAACTTAGGGAAGGACAGGGAAATGGCTGCATCGGAAGTAGATAAAATCAACGACATAAAAGATGGTGTTATCTATGATGATGAATTGCAAAAGATGATAGCAGATTTGTTCATGGACAATGCTAGATTGAGAAAAAAGATGAACTGTGTCACGAGGCATGCTCTCAAATTGGACACGTCAGCAATTGACGATTCTCCAGTGGACGCTGTAACAAGTGATAGTATGAACTGA 2142 0.4183 MLRQSPPKHRHDGTSPLPLGMDWSPPPRNWNGRDTVWPHSHRTGWSYCVTIPSWVFLPKTRNSDPIVFYRVQVGLQSPEGITTLHGVLRRFNDFLKLFADLKREFPRKSIPSAPPKGLVRLKSRALLEERRCSLEEWITKLLSDIDVSRCAAVASFLELEAAARASFQDSNQQNSESDPAANNTAFSVQSPLHSNLALGAGSSSIASDYGSDTAYEPSELGTPRVGLDDQSEVGTDDLTLDEDVTSPMEKLVKYGISNIDEGLFMGQTILEQLEGLPKHKVNARHFSYAAVNKNNGNASHLAKDPMELFSEPEHSKFIGHVRKLSNESVGSDGSSLRGNDFSATGIPNGSVDLPGNTAVSRTPDIGHAEMQSAGDTQVVLPLDQRHKLNRILLTMQRRLVTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELDTTKQKSKENLQQAILIERERFTQMQWDMEELRQKSLEMEMKLKSEVGENSCQNSTNESVVQEKEELFQTLNATKEQLEILSKQYNELEAKSKADVKVLVKEVKSLRNSQSELKRELSESIKEKCEAEKLLQHEREKREHAESASRNLMQKCKLLFNQLQQCNITFPTEDQDNTTTNSSSLEETANQLALSDDRIGVLLAEVENLGKDREMAASEVDKINDIKDGVIYDDELQKMIADLFMDNARLRKKMNCVTRHALKLDTSAIDDSPVDAVTSDSMN 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0653 713 Coils Coil 565 585 - -
Lele04g0653 713 Gene3D - 48 185 IPR036871 GO:0035091
Lele04g0653 713 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Lele04g0653 713 MobiDBLite consensus disorder prediction 209 236 - -
Lele04g0653 713 MobiDBLite consensus disorder prediction 1 25 - -
Lele04g0653 713 Pfam PX domain 87 158 IPR001683 GO:0035091
Lele04g0653 713 Coils Coil 491 525 - -
Lele04g0653 713 Coils Coil 420 447 - -
Lele04g0653 713 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Lele04g0653 713 Coils Coil 530 557 - -
Lele04g0653 713 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 697 IPR044588 GO:0015031
Lele04g0653 713 SMART PX_2 55 160 IPR001683 GO:0035091
Lele04g0653 713 FunFam Phox (PX) domain-containing protein 46 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0653 Lele-ChrLele04 3926011 3931221 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0653 04 3926011 3931221 Lele04g0653 04 3926011 3931221 ECH
Lele03g0646 03 3789891 3795102 Lele04g0653 04 3926011 3931221 ECH
Lele01g0647 01 3782077 3787265 Lele04g0653 04 3926011 3931221 hybridization
Lele02g0633 02 3786797 3792014 Lele04g0653 04 3926011 3931221 hybridization