Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0646 ATGCTGCGACAGAGTCCTCCCAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGGATGGACTGGAGTCCTCCACCACGAAATTGGAATGGACGGGATACAGTATGGCCACACAGTCATCGTACAGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGTCTTTCTTCCTAAAACAAGAAATTCAGATCCCATCGTGTTTTACAGGGTTCAAGTTAGTCTACAATCACCAGAAGGCATCACAACGCTACATGGAGTACTGAGAAGGTTCAACGATTTTTTAAAGTTGTTTGCAGATCTTAAAAGGGAGTTTCCCAGGAAAAGCATTCCTTCAGCTCCACCTAAAGGACTTGTACGATTGAAAAGCCGAGCATTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTTTTGTCAGACATTGATGTATCTAGATGTGCTGCAGTGGCATCCTTTCTTGAATTAGAGGCTGCAGCTAGAGCTTCTTTTCGAGATTCAAATAAGCAGAATTCAGAATCATATCCCGCTTCCAATGACACAGCTTTTTCTGTGCAATCACCTCTCCATTCAAACTTATCATTAGGTGCTGGCAGTTCATCTATTGCATCAGATTATGGTAGTGATACTGCATATGAGCCATCTGAACTTGGAACACCAAGAGTTGGGCTGGATGATCATTCTGAAGTTGACACAGATGATTTAACATTAGATGAAGATGTGACAAGTCCGATGGAAAATCTTGTCAAGTATGGTATATCAAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTTTAGAACAGCTGGAAGGCCTTCCTAAGCATAAAGTAAATGCCAGACATTTCAGTTATGCTGCAGAGAACAAAAATAATGGAAATGCTTTTAATGCTTCACACATGGCTAAAAGCCCGATGGAGCTTTTCTCTGAACCTGAGCATGCTAAGGTTATTGGTCGTGTTCGCAAGCTTTCAAATGAGAGTGTGGGAAGTGATGGAAGCTCTTTGAGGGGTAGTGACTTTTCTGCCACCGGAATTCCAAATGGCTCTATTGACCTTCCTGGAAATAACACGGTATCCAGAACACCAGATATAGGTCATGCGGAGACGCAGTCTACTGGTGATACTCAAGTAGTCTTTCCACTAGATCAGCGCCATAAATTAAATAGGATTCTTTTAACCATGCAGCGAAGGCTAGTTACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCTGCCAAGGATTTTCTTGCAACCAAGGTCAAGGATTTGGAAGTAGAACTTGATACTACTAAACAGAAGAGTAAAGAAAACTTGCAACAGGCTATTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAGCTTCGTCGAAAGTCATTGGAAATGGAGATGAAACTAAAATCTGAAGTGGGTGACAATTCATGTCAGAATTCAACCAATGAATCAGTTGTTCAGGAGAAAGAACTGTTTCAGACTTTGAATGCTACTAAAGATCAGCTGGAAATTTTGTCAAAACAGTATAATGAGCTAGAAGCAAAATCTAAAGCTGATGTTAAGGTCCTGGTTAAAGAGGTCAAATCTCTCCGAAATTCCCAATCAGAATTGAAGAGGGAGCTTAGTGAATCAATAAAGGAAAAGTGTGAAGCTGAGAAACTTCTTCAACATGAAAGAGAGAAGAGGGAACATGCTGAATCTGCTTCAAGAAATCAGATGCAGAAATGCAGGCTTCTGTTCGACCGGCTTCAGCAGTGCAACATCACTTTATCGACAGATGATCAAGATAACACAATAACAAACTCGTCGTCTTTAGAAGAGACCGCGAACCAGTTAGCAGTATCTGACGATCAAATCGGCGTCCTACTAGCAGAGGTAGAAAACTTAGGGAAGGACAGTGGAATGCCTGCATCTGAAGTAGATAAAATCAATGACATAAAAGATGGTGGTATCTATGATGATGAATTGCAAAACATGATGGCAGATCTGTTCATCGACAATGCTAGATTGAGAAAAAAGATGAACAGTGTCACGAGGTATGCTCTCAGATTGGAGACGTCAGCAATTGATCGTCCTCCAGTGGACACTGTAACAAGTGATAGTATGAACTGA 2148 0.4162 MLRQSPPKHRHDGTSPLPLGMDWSPPPRNWNGRDTVWPHSHRTGWSYCVTIPSWVFLPKTRNSDPIVFYRVQVSLQSPEGITTLHGVLRRFNDFLKLFADLKREFPRKSIPSAPPKGLVRLKSRALLEERRCSLEEWITKLLSDIDVSRCAAVASFLELEAAARASFRDSNKQNSESYPASNDTAFSVQSPLHSNLSLGAGSSSIASDYGSDTAYEPSELGTPRVGLDDHSEVDTDDLTLDEDVTSPMENLVKYGISNIDEGLFMGQTILEQLEGLPKHKVNARHFSYAAENKNNGNAFNASHMAKSPMELFSEPEHAKVIGRVRKLSNESVGSDGSSLRGSDFSATGIPNGSIDLPGNNTVSRTPDIGHAETQSTGDTQVVFPLDQRHKLNRILLTMQRRLVTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELDTTKQKSKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSEVGDNSCQNSTNESVVQEKELFQTLNATKDQLEILSKQYNELEAKSKADVKVLVKEVKSLRNSQSELKRELSESIKEKCEAEKLLQHEREKREHAESASRNQMQKCRLLFDRLQQCNITLSTDDQDNTITNSSSLEETANQLAVSDDQIGVLLAEVENLGKDSGMPASEVDKINDIKDGGIYDDELQNMMADLFIDNARLRKKMNSVTRYALRLETSAIDRPPVDTVTSDSMN 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0646 715 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Lele03g0646 715 SMART PX_2 55 160 IPR001683 GO:0035091
Lele03g0646 715 Coils Coil 532 559 - -
Lele03g0646 715 Coils Coil 507 527 - -
Lele03g0646 715 Pfam PX domain 87 158 IPR001683 GO:0035091
Lele03g0646 715 Gene3D - 48 183 IPR036871 GO:0035091
Lele03g0646 715 Coils Coil 423 450 - -
Lele03g0646 715 FunFam Phox (PX) domain-containing protein 46 184 - -
Lele03g0646 715 MobiDBLite consensus disorder prediction 209 232 - -
Lele03g0646 715 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Lele03g0646 715 MobiDBLite consensus disorder prediction 1 25 - -
Lele03g0646 715 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 698 IPR044588 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0646 Lele-ChrLele03 3789891 3795102 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0646 03 3789891 3795102 Lele03g0646 03 3789891 3795102 ECH
Lele03g0646 03 3789891 3795102 Lele04g0653 04 3926011 3931221 ECH
Lele01g0647 01 3782077 3787265 Lele03g0646 03 3789891 3795102 hybridization
Lele02g0633 02 3786797 3792014 Lele03g0646 03 3789891 3795102 hybridization